DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and sks5

DIOPT Version :10

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_177743.1 Gene:sks5 / 843948 AraportID:AT1G76160 Length:541 Species:Arabidopsis thaliana


Alignment Length:567 Identity:122/567 - (21%)
Similarity:210/567 - (37%) Gaps:127/567 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GIALATQLAAND-------DCKYAD----GLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMHE 168
            |::|...:.|.|       :..|.|    |:..:.:::||..||.:|.....|.::.:|.||:.|
plant    14 GLSLLFAVTAEDPYRFFEWNITYGDIYPLGVRQQGILINGAFPGPDIHSVTNDNLIINVYNSLDE 78

  Fly   169 TTTIHWHGMHQRLTPFMDGVPHVTQYPIEAGQAFRYRFEVDH--GGTNWWHSHTEHQRAFGLAGP 231
            ...:.|:|:.||...|:||| :.|..||..|:.:.|..::..  |...::.|...|:.|.|..|.
plant    79 PFLLSWNGIQQRRNSFVDGV-YGTTCPIPPGKNYTYILQMKDQIGSFYYFPSLGFHKAAGGFGGI 142

  Fly   232 LVVRMP----PKLNPHAHLYDFDMSEHVIMIQDWV---HNFVESVAEN---------ILINGRGR 280
            .::..|    |..:|        ..:..::|.||.   |..:.:..:|         ||||||..
plant   143 RILSRPRIPVPFPDP--------AGDTTVLIGDWYKANHTDLRAQLDNGKKLPLPDGILINGRSS 199

  Fly   281 NLKKGVKAAKPTLYAHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQR 345
            .             |...|.:|..||||:...|:.: .::|.|..|.:.|:..:|..........
plant   200 G-------------ATLNVEQGKTYRFRISNVGLQD-SLNFRIQDHKMKVVEVEGTHTLQTTFSS 250

  Fly   346 IMFHGAERFDFVLHANQEVSNYWIRVKGYSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDAP 410
            :..|..:.:..::.|:|...:|::.|.  |....|.|....:..|.::        ....:...|
plant   251 LDVHVGQSYSVLVTADQTPRDYYVVVS--SRFTSNVLTTTGIFRYSNS--------AGGVSGPIP 305

  Fly   411 GKTLNELGDDASGARAGNSISLANLNAQRPEPEVAPSVTFYTSM--------NAFEVRQGEG-FR 466
            |....::....:.|||..:    ||:|..|.|.  |..:::..|        .|....|.:| .|
plant   306 GGPTIQIDWSLNQARAIRT----NLSASGPRPN--PQGSYHYGMINTTRTIRLASSAGQVDGKQR 364

  Fly   467 FQMDDISFSMPKMSL----------------LQTRNLGVGQFFCNRSQQADLGFNCRQRHCQCSN 515
            :.::.:||......|                :|.:..|.|.:.                   .::
plant   365 YAVNSVSFKPADTPLKIADYFKIDGVYRSGSIQYQPTGGGIYL-------------------DTS 410

  Fly   516 VIQVPANQQVEFVISSLSQTPHPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPR---RAKG 577
            |:||.....||.:..:........||.||:|.||||.  |.|          .:|..|   ..:.
plant   411 VMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMD--GGQ----------WSPDSRNEYNLRD 463

  Fly   578 APLKDSVQVPAFGYTILRFYSNSPGYWMFHCHISPHSENGMAAVVRV 624
            |..:.:|||....:|.:....::.|.|............|....:||
plant   464 AVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 SufI 131..624 CDD:441735 115/542 (21%)
sks5NP_177743.1 PLN02991 10..541 CDD:215536 122/567 (22%)

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