DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco4 and sks7

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_173604.1 Gene:sks7 / 838788 AraportID:AT1G21860 Length:538 Species:Arabidopsis thaliana


Alignment Length:551 Identity:112/551 - (20%)
Similarity:201/551 - (36%) Gaps:143/551 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMHETTTIHWHGMHQRLTPFMDGVPHVTQYPIE 197
            |:..:.:::||:.||.:|.....|.::.:|.|.:.|...:.|:|:......|.||| :.|..||.
plant    44 GVAQQGILINGKFPGPDIISITNDNLIINVFNHLDEPFLLSWNGIRNWKNSFQDGV-YGTMCPIP 107

  Fly   198 AGQAFRYRFEVDH--GGTNWWHSHTEHQRAFGLAGPLVVRMPPK-LNPHAHLYDFDMSEHVIMIQ 259
            .|:.:.|..:|..  |...::.|...|:.|.|..|   :|:..: |.|..  :.....::.:::.
plant   108 PGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGG---IRISSRALIPVP--FPTPADDYTLLVG 167

  Fly   260 DWV---HNFVESVAEN---------ILINGRGRNLKKGVKAAKPTLYAHFPVVRGGRYRFRVIFN 312
            ||.   |..:::..:|         ||||||.......::..|             .||.|:...
plant   168 DWYKTNHKDLKAQLDNGGKLPLPDGILINGRSSGATLNIEPGK-------------TYRLRISNV 219

  Fly   313 GVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIM----FHGAERFDFVLHANQEVSNYWIRVKG 373
            |:.| .::|.|..|.:.::..:|.    ..:|.:.    .|..:.:..::.|:|...:|::.|..
plant   220 GLQN-SLNFRIQNHTMKLVEVEGR----YTIQNLFSSLDVHVGQSYSVLITADQPAKDYYVVVSS 279

  Fly   374 YSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDAPGKTLNELGDDASGARAGNSISLA----- 433
             .|.:| .|....||||.::              .||          .||......|.|:     
plant   280 -RFTSK-ILTTTGVLHYSNS--------------VAP----------VSGPIPDGPIKLSWSFNQ 318

  Fly   434 ------NLNAQRPEP-----------EVAPSVTFYTSMNAFEVRQGEGFRFQMDDISF--SMPKM 479
                  ||.|..|.|           .:..::....::...|.:|    |:.::..||  :...:
plant   319 ARAIRTNLTASGPRPNPQGSYRYGVINITRTIRLANNLGHIEGKQ----RYAVNSASFYPADTPL 379

  Fly   480 SLLQTRNL-GV------------GQFFCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVISS 531
            .|:....: ||            |..|                  ..::|:|......||.:..:
plant   380 KLVDYFKIDGVYKPGSISDQPTNGAIF------------------PTTSVMQADFRAFVEVIFEN 426

  Fly   532 LSQTPHPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPRRA---KGAPLKDSVQVPAFGYTI 593
            ........||.||:|.||||            ::.|.:|..|:.   ..|.|:.::||....:|.
plant   427 SEDIVQSWHLDGYSFYVVGM------------ELGKWSPASRKVYNLNDAILRCTIQVYPRSWTA 479

  Fly   594 LRFYSNSPGYWMFHCHISPHSENGMAAVVRV 624
            :....::.|.|.....|......|....:||
plant   480 IYIALDNVGMWNMRSEIWERQYLGQQFYMRV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 112/551 (20%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 28/103 (27%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 31/152 (20%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 34/175 (19%)
sks7NP_173604.1 PLN02991 1..538 CDD:215536 112/551 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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