DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco4 and LAC13

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_196330.3 Gene:LAC13 / 830604 AraportID:AT5G07130 Length:569 Species:Arabidopsis thaliana


Alignment Length:557 Identity:156/557 - (28%)
Similarity:243/557 - (43%) Gaps:117/557 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 MVVNGQLPGMNIEVCYGDTVVADVINSMHETTTIHWHGMHQRLTPFMDGVPHVTQYPIEAGQAFR 203
            :.||||.||..:||..||::|...||......::||||:.|...|:.||..::||.||:.|.::.
plant    45 ITVNGQFPGPTLEVRNGDSLVITAINKARYNISLHWHGIRQMRNPWADGPEYITQCPIQPGGSYT 109

  Fly   204 YRFEV-DHGGTNWWHSHTEHQRAFGLAGPLVVRMPPKLNPHAHLYDFDM---SEHVIMIQDW--- 261
            |||.: |..||.|||:|:...|| .:.|.|::| ||..:||   |.|.:   .|..:::.:|   
plant   110 YRFTMEDQEGTLWWHAHSRWLRA-TVYGALIIR-PPLSSPH---YPFPVIPKREITLLLGEWWDR 169

  Fly   262 ----VHNFVE------SVAENILINGRGRNLKKGVKAAKPTLYAHFPVVRGGRYRFRVIFNGVSN 316
                |.|..:      ::::...|||:..:|.:  .:::.||  .|.|..|.....||| |...|
plant   170 NPMDVLNLAQFTGAAPNISDAFTINGQPGDLYR--CSSQETL--RFLVGSGEIVLLRVI-NSALN 229

  Fly   317 CPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHGAERFDFVLHANQEVSNYWIRVKGYSF--CAK 379
            ..:.|.:..|.|.|:|:|.:..:|.....||....:..|.:|.|:|..::|::....|:.  .|.
plant   230 QELFFGVANHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLLTADQPPAHYYMAAHAYNSANAAF 294

  Fly   380 NQLHQEAVLHYRDADTRALDTHTLSYAYDA--PGKTLNELGDDASGARAGNSISLANLNAQRPEP 442
            :.....|:|.|:||....|...:.:.|..|  ||     ..|.|:.|.         ..||...|
plant   295 DNTTTTAILKYKDASCVTLQAKSQARAIPAQLPG-----FNDTATAAA---------FTAQMKSP 345

  Fly   443 -------EVAPSVTFYTSMNAFEVR-------QG-EGFRF--QMDDISFSMPKM-SLLQ------ 483
                   |:..::.|...:..|...       || .|.||  .::::||..||. |::|      
plant   346 SKVKVPLEIDENLFFTVGLGLFNCPTPNTQRCQGPNGTRFTASINNVSFVFPKQNSIMQAYYQGT 410

  Fly   484 -------------------TRNLGVGQFFCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVI 529
                               |.|:..|.:...|..:|                .::..|.||:.::
plant   411 PTGVFTTDFPPTPPVTFDYTGNVSRGLWQPTRGTKA----------------YKLKFNSQVQIIL 459

  Fly   530 ---SSLSQTPHPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPRRAKGAPLKDSVQVPAFGY 591
               |.::...||:|||||.|.|||.||............:...| |||       :::..|..|:
plant   460 QDTSIVTTENHPMHLHGYEFYVVGTGVGNFNPNTDTSSFNLIDP-PRR-------NTIGTPPGGW 516

  Fly   592 TILRFYSNSPGYWMFHCHISPHSENGMAAV--VRVGE 626
            ..:||.:|:||.|:.||||..|...|:|.|  |..||
plant   517 VAIRFVANNPGAWLMHCHIDSHIFWGLAMVFLVENGE 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 154/555 (28%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 40/96 (42%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 36/151 (24%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 51/190 (27%)
LAC13NP_196330.3 laccase 21..569 CDD:274556 156/557 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I1224
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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