DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco4 and LAC12

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_196158.1 Gene:LAC12 / 830421 AraportID:AT5G05390 Length:565 Species:Arabidopsis thaliana


Alignment Length:612 Identity:158/612 - (25%)
Similarity:257/612 - (41%) Gaps:126/612 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VVHYDDTMAETCKRYLQSKFRFKLSGKEYIDGIALATQLAANDDCKYADGLESEVMVVNGQLPGM 148
            |.|:|..:.||..:.|                            ||..:.:     .|||..||.
plant    26 VQHHDFVIQETPVKRL----------------------------CKTRNAI-----TVNGMFPGP 57

  Fly   149 NIEVCYGDTVVADVINSMHETTTIHWHGMHQRLTPFMDGVPHVTQYPIEAGQAFRYRFEVD-HGG 212
            .:||..|||:...|.|......||||||:.|..|.:.||...|||.||..|:::.|||.:. ..|
plant    58 TLEVNNGDTLEVKVHNRARYNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEG 122

  Fly   213 TNWWHSHTEHQRAFGLAGPLVVRMPPKLNPHAHLYDFDMSEH--VIMIQDWVH-NFVESV----- 269
            |.|||:|:...|| .:.|.|::...|     ...:.|...:.  .:|:.:|.: |.|:.:     
plant   123 TLWWHAHSSWLRA-TVYGALIIHPTP-----GSSFPFPKPDRQTALMLGEWWNANPVDVINQATR 181

  Fly   270 ---AENI----LINGRGRNLKKGVKAAKPTLYAHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHD 327
               |.||    .|||:..:|..  .:.|.|:..  |:..|.....||| |...|.|:.|::..|.
plant   182 TGAAPNISDAYTINGQPGDLYN--CSTKETVVV--PINSGETSLLRVI-NAALNQPLFFTVANHK 241

  Fly   328 LVVIASDGNDIEPVEVQRIMFHGAERFDFVLHANQEVSNYWIRVKGYSFCAKN----QLHQEAVL 388
            |.|:.:|.:.::|...:.:|....:..|.:|.|:|....|:|..:.|. .|:|    .....|:|
plant   242 LTVVGADASYLKPFTTKVLMLGPGQTTDVLLTADQPPKRYYIAARAYQ-SAQNAPFDNTTTTAIL 305

  Fly   389 HYRDADTRAL----------DTHTLSYAYDAPGKTLNELG-----DDASGARAGNSISLANLNAQ 438
            .|:...|.:.          ||:|:: ::....|:|..:.     ||......|  :.|.|...:
plant   306 QYKKTTTTSKPIMPVLPAFNDTNTVT-SFSRKFKSLRNVVVPKTIDDNLFFTIG--LGLDNCPKK 367

  Fly   439 RPEPEVAPSVTFYTSMNAFEVRQG-EGFRF--QMDDISFSMP-KMSLLQTRNLGV-GQFFCNRSQ 498
            .|:...                || .|.||  .|:::||.:| ..||||..:.|: |.|..:...
plant   368 FPKSRC----------------QGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPS 416

  Fly   499 QADLGFNCRQRH--------CQCSNVIQVPANQQVEFVISS---LSQTPHPIHLHGYTFRVVGMG 552
            :..:.|:....:        .:.:.:.::....:|:.|:..   ::...||||||||.|.:||.|
plant   417 KPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIVGEG 481

  Fly   553 VLGEQKIGQIEQIDKKTPLPRRAKGAPLKDSVQVPAFGYTILRFYSNSPGYWMFHCHISPHSENG 617
                  .|...  .||..........||:::|.||..|:.::||.:::||.|:.|||:..|.:.|
plant   482 ------FGNFN--PKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHIKWG 538

  Fly   618 MAAVVRVGE---DVEMKMCPVSNCGLC 641
            :|....|..   ::|....|..:..:|
plant   539 LAMAFLVDNGVGELETLEAPPHDLPIC 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 147/544 (27%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 41/103 (40%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 39/155 (25%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 48/180 (27%)
LAC12NP_196158.1 laccase 24..565 CDD:274556 157/610 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I1224
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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