DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and AT4G39830

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_195693.1 Gene:AT4G39830 / 830142 AraportID:AT4G39830 Length:582 Species:Arabidopsis thaliana


Alignment Length:575 Identity:166/575 - (28%)
Similarity:251/575 - (43%) Gaps:107/575 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KYADGLESEVMVVNGQLPGMNIEVCYGDTVVADVINS-MHETTTIHWHGMHQRLTPFMDGVPHVT 192
            |..|..|..|:.:||:.||..|:...|||:|.::.|| |.|...:||||:.|..||:.|||..||
plant    47 KSPDCFEKLVITINGKFPGPTIKAQQGDTIVVELKNSFMTENVAVHWHGIRQIGTPWFDGVEGVT 111

  Fly   193 QYPIEAGQAFRYRFEVDHGGTNWWHSHTEHQRAFGLAGPLVVRMPPKLNPHAHLYDFDMSEHVIM 257
            |.||..|:.|.|:|.||..||..:|||...||..||.|.:.| .||...|....||:|.:   .:
plant   112 QCPILPGEVFIYQFVVDRPGTYMYHSHYGMQRESGLIGMIQV-SPPATEPEPFTYDYDRN---FL 172

  Fly   258 IQDWVHNFVESVA--------------ENILINGRGR-----------NLKKGVKAAKPTLYAHF 297
            :.||.|..:...|              ::::|.||||           :|..||........:.|
plant   173 LTDWYHKSMSEKATGLASIPFKWVGEPQSLMIQGRGRFNCSNNLTTPPSLVSGVCNVSNADCSRF 237

  Fly   298 --PVVRGGRYRFRV-IFNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHGAERFDFVLH 359
              .|:.|..||.|: ....:|  .:||.|:.|:|.|:.:||:.:||..|:.:..:..|.:..:|.
plant   238 ILTVIPGKTYRLRIGSLTALS--ALSFQIEGHNLTVVEADGHYVEPFTVKNLFVYSGETYSVLLK 300

  Fly   360 ANQEV-SNYWIRVKGYSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDAPGKTLNELGDDASG 423
            |:|.. .||||.....|..|... ...|||:|.....|.          ..|....:.:..:.:.
plant   301 ADQNPRRNYWITSSIVSRPATTP-PATAVLNYYPNHPRR----------RPPTSESSNIVPEWND 354

  Fly   424 ARAGNSISLANLNAQR------PE--PEVAPSVTFYTSMNAFEVRQGEGFRFQMDDISFSMPKMS 480
            .|:..:.||| :.|:|      ||  .:|...:.....:|.:.       |:.::::|:..||..
plant   355 TRSRLAQSLA-IKARRGFIHALPENSDKVIVLLNTQNEVNGYR-------RWSVNNVSYHHPKTP 411

  Fly   481 LLQTRNLGVGQFFCNRSQQADLGFNCRQRH----------------CQCSNVIQVPANQQVEFVI 529
            .|    :.:.|   |.:...|..|...:.:                .....:.::..|..|:.::
plant   412 YL----IALKQ---NLTNAFDWRFTAPENYDSRNYDIFAKPLNANATTSDGIYRLRFNSTVDVIL 469

  Fly   530 SSL-------SQTPHPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPRRAKGA-PL-KDSVQ 585
            .:.       |:| ||.||||:.|.|:|   .||.|..:.|.       |:|.... |: |::|.
plant   470 QNANTMNANNSET-HPWHLHGHDFWVLG---YGEGKFNESED-------PKRYNRVDPIKKNTVA 523

  Fly   586 VPAFGYTILRFYSNSPGYWMFHCHISPHSENGMAAVVRVGED-VEMKMCPVSNCG 639
            |..||:|.|||.:::||.|.|||||..|...||..|...|.| |......:..||
plant   524 VQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFESGIDKVSSLPSSIMGCG 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 160/556 (29%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 47/103 (46%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 43/165 (26%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 52/190 (27%)
AT4G39830NP_195693.1 PLN02604 10..582 CDD:215324 166/575 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1881
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H135473
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58299
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

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