DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and sks9

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_195555.2 Gene:sks9 / 829999 AraportID:AT4G38420 Length:549 Species:Arabidopsis thaliana


Alignment Length:507 Identity:106/507 - (20%)
Similarity:193/507 - (38%) Gaps:141/507 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 IALATQLAANDDCKYAD-----------GLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMHET 169
            |::.:.:.|:|..::.|           |:....:::|||.||.:|.....|.::.:|.|.:.|.
plant    17 ISIISFVQADDPYRFFDWRVTYGNISPLGIPQRGILINGQYPGPDIYSVTNDNLIINVHNDLDEP 81

  Fly   170 TTIHWHGMHQRLTPFMDGVPHVTQYPIEAGQAFRYRFEVDH--GGTNWWHSHTEHQRAFGLAGPL 232
            ..:.|:|:..|...:.||| :.|..||..|:.:.|..:|..  |...::.|...|:.|.|..|..
plant    82 FLLSWNGVQLRKNSYQDGV-YGTTCPIPPGKNYTYAIQVKDQIGSFFYFPSLAVHKAAGGFGGFR 145

  Fly   233 VVRMP----PKLNPHAHLYDFDMSEHVIMIQDWV---HNFVESV---------AENILINGRGRN 281
            ::..|    |...|..   ||     ..:|.||.   |..::::         .:.:||||:|.:
plant   146 ILSRPRIPVPFPEPAG---DF-----TFLIGDWFKHDHKVLKAILDRGHKLPLPQGVLINGQGVS 202

  Fly   282 LKKGVKAAKPTLYAHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRI 346
            ....:           .|.:|..||||:...|:.: .::|.|..|.:.::..:|..........:
plant   203 YMSSI-----------TVHKGKTYRFRISNVGLQH-TLNFRIQGHQMKLVEVEGTHTVQSMYTSL 255

  Fly   347 MFHGAERFDFVLHANQEVSNYWIRVKGYSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDAPG 411
            ..|..:.:..::..:|...:|.| |....|.|| :|...:.:||                     
plant   256 DIHVGQSYSVLVTMDQPDQDYDI-VVSTKFVAK-KLLVSSTIHY--------------------- 297

  Fly   412 KTLNELGDDASGARAGNSISLANLNAQRPEPEVAPSV----TFYTSMNAFEVR---QGEGFRFQM 469
                      |.:|..:|.|..:::.|:|..|:..|:    :..|::.|...|   ||       
plant   298 ----------SNSRHSHSSSANSVHVQQPADELDWSIKQARSIRTNLTASGPRPNPQG------- 345

  Fly   470 DDISFSMPKMSLLQTRNLGVGQFFCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVISSLSQ 534
               |:...::.:.:|..|........|.|:                           :.|:.:|.
plant   346 ---SYHYGRIKISRTLILESSAALVKRKQR---------------------------YAINGVSF 380

  Fly   535 TP--HPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPRRAKGAPLKDSV 584
            .|  .|:.|..| |::.|:     .|:|.|.  ||    |||.:|..::.||
plant   381 VPGDTPLKLADY-FKIKGV-----FKMGSIP--DK----PRRGRGMRMETSV 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 103/491 (21%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 30/115 (26%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 29/148 (20%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 24/119 (20%)
sks9NP_195555.2 PLN02792 13..548 CDD:178389 106/507 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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