DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and sks4

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_193932.1 Gene:sks4 / 828290 AraportID:AT4G22010 Length:541 Species:Arabidopsis thaliana


Alignment Length:524 Identity:128/524 - (24%)
Similarity:205/524 - (39%) Gaps:102/524 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 YADGLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMHETTTIHWHGMHQRLTPFMDGVPHVTQY 194
            |..|::.:.:::|||.||.:|:....|.::..|.|.:.|...|.|:|:.||...:.|||...| .
plant    38 YPLGVKQQGILINGQFPGPHIDAITNDNIIISVFNYLKEPFLISWNGVQQRKNSWQDGVVGTT-C 101

  Fly   195 PIEAGQAFRYRFEV-DHGGTNWWHSHTEHQRAFGLAGPLVV----RMPPKLNPHAHLYDFDMSEH 254
            ||..|:.|.|..:| |..|:.::.......:|.|..|.:.|    |:|...:|.    |.|.   
plant   102 PIPPGKNFTYVIQVKDQIGSFYYFPSLAFHKAAGAFGAIRVWSRPRIPVPFSPP----DGDF--- 159

  Fly   255 VIMIQDWV---HNFVESVAE---------NILINGRGRNLKKGVKAAKPTLYAHFPVVRGGRYRF 307
            .::..||.   |..:..:.|         .:||||||.....            |.|..|..|||
plant   160 WLLAGDWYKTNHYVLRRLLEAGRNLPNPDGVLINGRGWGGNT------------FTVQPGKTYRF 212

  Fly   308 RVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIM----FHGAERFDFVLHANQEVSNYW 368
            |:...||:. .::|.|..|.:.::..:|:.    .||.|.    .|..:.:..::.|||...:|:
plant   213 RISNVGVAT-SLNFRIQGHTMKLVEVEGSH----TVQNIYTSLDIHLGQSYSVLVTANQAPQDYY 272

  Fly   369 IRVKGYSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDAP---GKTLNELGDDASGARAGNSI 430
            |.:.  |...:..|...::|||.::          ......|   |.||    |.||......:|
plant   273 IVIS--SRFTRKVLTTTSILHYSNS----------RKGVSGPVPNGPTL----DIASSLYQARTI 321

  Fly   431 SLANLNAQRPEPE---------VAPSVTFYTSMNAFEVRQGEGFRFQMDDISFSMPKMSLLQTRN 486
            . .||.|..|.|.         :.|..|...:.:|..:...:  |:.::..||..|...|.....
plant   322 R-RNLTASGPRPNPQGSYHYGLIKPGRTIILANSAPWINGKQ--RYAVNGASFVAPDTPLKLADY 383

  Fly   487 LGV-GQFFCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVISSLSQTPHPIHLHGYTFRVVG 550
            ..: |.|.......:..|.|  ..:.| |:|:.....:.:|.|..:...:....|:.||:|.|||
plant   384 FKIPGVFNLGSIPTSPSGGN--GGYLQ-SSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVG 445

  Fly   551 MGVLGEQKIGQIEQIDKKTPLPR---RAKGAPLKDSVQVPAFGYTILRFYSNSPGYWMFHCHISP 612
            |.  |.|          .||..|   ..:.|..:.:|||....:|.:....::.|.|      :.
plant   446 MD--GGQ----------WTPGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVGMW------NI 492

  Fly   613 HSEN 616
            .|||
plant   493 RSEN 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 127/522 (24%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 32/107 (30%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 35/152 (23%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 36/153 (24%)
sks4NP_193932.1 PLN02991 9..538 CDD:215536 128/524 (24%)
Cupredoxin 27..142 CDD:302766 32/104 (31%)
Cupredoxin 157..292 CDD:302766 36/156 (23%)
Cupredoxin 374..496 CDD:302766 32/142 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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