DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and Hephl1

DIOPT Version :10

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001178922.2 Gene:Hephl1 / 500946 RGDID:1564835 Length:1159 Species:Rattus norvegicus


Alignment Length:624 Identity:112/624 - (17%)
Similarity:204/624 - (32%) Gaps:190/624 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DKQPMTCYYYMVVHYDDTMA----ETCKRYLQSKFRFKLSGKEYIDGIALATQLAANDDCKYADG 133
            ||:    :|.:...:|:..:    |..:::....|......||::.                   
  Rat   575 DKE----FYLLFTVFDENFSSYLDENIQKFTWHPFSVDKEDKEFVK------------------- 616

  Fly   134 LESEVMVVNGQL----PGMNIEVCYGDTVVADVI-----NSMH----ETTTIHWHGMHQ-RLTPF 184
             .:.:..:||.:    ||::  :|..|.|...:|     ..||    :..|||..|.|: .|..|
  Rat   617 -SNRMHAINGYMYGNQPGLS--MCKKDRVSWHLIGMGTDTDMHGVYFQGNTIHLRGTHRDSLALF 678

  Fly   185 MDGVPHVTQYPIEAGQAFRYRFEVDHGGTNWWHSHTEHQRAFGLAGPLVV----RMPPKLNPHAH 245
                ||::.      .||   .:.||.|.......|.|....|:.....|    ...|...|:..
  Rat   679 ----PHMST------TAF---MQPDHSGIFKVFCSTLHHFTRGMGQIYEVSSCGNRDPSEPPYGM 730

  Fly   246 LYDFDMSEHVIMIQDWVHNFVESVAENILINGRGRNLKKGVKAAKPTLYAHFPVVRGGRYRFRVI 310
            |..|.::...:   :|      ..|.|.......::|..|.:........|.....|.:|| :|:
  Rat   731 LRTFYIAAEEV---EW------DYAPNKNWEFEKQHLDAGGERHGDIFMNHTENWIGSQYR-KVV 785

  Fly   311 FNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHGAERFD--FVLHANQEVSNYWIRVKG 373
            :...:|         .:.|.|.:.....|.:::...|.| ||..|  .::..|:....|.|..:|
  Rat   786 YREYTN---------GEFVEIKARPPQEEHLQLLGPMIH-AEVGDSILIIFKNKASRPYSITAQG 840

  Fly   374 YSFCAKNQLHQEAVLHYRDADT-RALDT------HTLSYAYDAPGKTLNELGDDASGARAGNSIS 431
                            ..|:|: :.||.      ...:|.::.|             .|:|...|
  Rat   841 ----------------VEDSDSGKFLDVPVTKPGEIKTYRWNVP-------------KRSGPGPS 876

  Fly   432 LANLNAQRPEPEVAPSVTFYTSMNAFEVRQG---------EGF---RFQMDDISFSMPKMSLLQT 484
                     :|...|.|.|.|:....:...|         ||.   :.:..|:.:....:.|:..
  Rat   877 ---------DPNCIPWVYFSTANFVKDTYSGLMGPLITCREGVLNEKGRRSDVDYEFALLFLVFN 932

  Fly   485 RNLGVGQFFCNRSQQADLGFNCRQ-RHC---QCSNVIQVPANQQVEFVISSLSQTP--------- 536
            .|   ..::.:.:.:..|..:.|. ||.   :.||.:.. .|.::...:..|..|.         
  Rat   933 EN---ESWYLDDNIKKYLNKDPRDFRHTDDFEESNRMHA-INGKIFGNLPGLIMTEDSMTNWYLL 993

  Fly   537 --------HPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPRRAKGAPLKDSVQVPAFGYTI 593
                    |.||.|..:|               :.:|||          :..:|...:....:..
  Rat   994 GIGSEVDIHTIHYHAESF---------------LFKIDK----------SYREDVYDLFPGTFQT 1033

  Fly   594 LRFYSNSPGYWMFHCHISPHSENGMAAVVRVGEDVEMKM 632
            :..:::.||.|:.|||:|.|...||.....|..:::.::
  Rat  1034 IELFADHPGTWLLHCHVSDHIHAGMETTYTVLRNIDNRI 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 SufI 131..624 CDD:441735 103/552 (19%)
Hephl1NP_001178922.2 CuRO_1_ceruloplasmin 26..208 CDD:259884
CuRO_2_ceruloplasmin 222..362 CDD:259907
CuRO_3_ceruloplasmin 376..572 CDD:259886
CuRO_4_ceruloplasmin 575..718 CDD:259908 36/181 (20%)
Cupredoxin 732..907 CDD:473140 39/232 (17%)
Cupredoxin 923..1065 CDD:473140 30/170 (18%)
Blue background indicates that the domain is not in the aligned region.

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