DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and f5

DIOPT Version :10

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001315460.1 Gene:f5 / 327320 ZFINID:ZDB-GENE-030131-5531 Length:2087 Species:Danio rerio


Alignment Length:481 Identity:95/481 - (19%)
Similarity:152/481 - (31%) Gaps:151/481 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DNQRHPCRRDCAD--KQPMTCYYYMVVH-----YDDTMAETCKRYLQSKFRFKL-------SGKE 111
            |....|.||...:  |:.....|||...     |...|.|.    :...||.|.       .||:
Zfish   327 DEYTAPKRRLTIEQKKESQEWTYYMAAEEVIWDYAPNMPEN----MDGDFRSKYLKQGPQRIGKK 387

  Fly   112 YIDGIALATQLAANDDCKYADGLESEVM--------------VVNGQLPGMNIEVCYGDTVVADV 162
            |..  |:.||        |.||:..|..              |:..|              :.|:
Zfish   388 YKK--AVFTQ--------YKDGMFKERAEDKQRKRELGILGPVIRAQ--------------IRDI 428

  Fly   163 I-----NSMHETTTIHWHGMHQRLTPFMDGVPHVTQYP--------IEAGQAFRYRFEVDHGG-- 212
            |     |......:|:.||:      .:|.......||        ::.|:.:.|.:.|....  
Zfish   429 IKIVFKNKASRPYSIYPHGL------TIDKAAEGASYPQGGNQTYSVQPGETYTYTWSVTEEDVP 487

  Fly   213 --------TNWWHSHTEHQR--AFGLAGPLVVRMPPKLNPHAHLYDFDMSEHVIMI-----QDWV 262
                    |..:||..:..|  |.||.|||::.....||........|..:|.:..     :.|.
Zfish   488 TDSDPRCLTRMYHSAVDAPRDIASGLVGPLLICKSQSLNKKNVQLKADKEQHAMFTVFDENKSWY 552

  Fly   263 HNFVESVAENILINGRGRNLKKGVKAAKPTLYAH--FPVVRGGRYRFRVIFNGVSNCPISFSIDK 325
            .:      ||  ||....:.|| ||...|..|..  ...:.|..|.        |...:.|.   
Zfish   553 QD------EN--INTYCSDPKK-VKKDDPEFYKSNVMHTINGYVYE--------SGQELGFC--- 597

  Fly   326 HDLVV---IASDGNDIEPVEVQRIMFHG-----AERFDFVLH----ANQEVSNYWIRVKGYSFCA 378
            |..:|   ::|.|   |...:|...|:|     ..|.:.:|.    ..:.::...:.:..:...:
Zfish   598 HGEIVTWHVSSVG---EQDYIQTATFYGHTFELKNREEDILSLFPMTGETITMNMVNIGIWLLAS 659

  Fly   379 KNQLHQEAVLHYRDADTRALDTHTLSYAYDAPGK-------TLNELG------------DDASGA 424
            .|.......:..:..|......:.:.|.|: .||       |:||:.            |:.|..
Zfish   660 LNSHDSTKGMRVKFKDLECFRDYVIEYDYE-DGKFTAWKPPTINEIKKEEPVRARPDVVDEYSDL 723

  Fly   425 RAGNSISLANLNAQRPEPEVAPSVTF 450
            .| .:::|...|..:.|.|:. .:||
Zfish   724 FA-ETLNLRTFNNVKDEVEII-DLTF 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 SufI 131..624 CDD:441735 74/397 (19%)
f5NP_001315460.1 CuRO_1_FV_like 28..187 CDD:259888
CuRO_2_FV_like 199..323 CDD:259995
CuRO_3_FV_like 345..522 CDD:259992 43/210 (20%)
CuRO_4_FV_like 535..678 CDD:259996 29/165 (18%)
MSCRAMM_ClfA <905..1239 CDD:468110
Cupredoxin 1447..1620 CDD:473140
CuRO_6_FV_like 1629..1770 CDD:259997
FA58C 1778..1923 CDD:238014
FA58C 1932..2083 CDD:238014
Blue background indicates that the domain is not in the aligned region.

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