DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and F8

DIOPT Version :10

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_899160.2 Gene:F8 / 302470 RGDID:727845 Length:2258 Species:Rattus norvegicus


Alignment Length:514 Identity:96/514 - (18%)
Similarity:169/514 - (32%) Gaps:172/514 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 RDCADKQPMTCYYYMVVHYDD----TMAETCK------RYL-------QSKFRFKLSGKEYIDGI 116
            |..|.:.|.|..:|:.....|    ..|.|.:      |||       .||:: |:....|.||.
  Rat   379 RSAAKRHPKTWVHYIAAEEGDWDYAPAAATLEDGSLRNRYLGRGPGRIGSKYK-KVRFVAYTDGT 442

  Fly   117 ALATQLAANDDCKYADGLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMHETTTIHWHG----- 176
            ....:....:.......|..||                ||:::....|.......||.||     
  Rat   443 FHTREATPREAGLLGPLLYGEV----------------GDSLLIVFKNRASRAYNIHPHGIRDVG 491

  Fly   177 -MHQRLTPFMDGVPHVTQYPIEAGQAFRYRFEV--DHGG--------TNWWHSHTEHQR--AFGL 228
             :|....|  .||.||...||..|:.|:||:.:  :.|.        |.::.|..:.:|  |.||
  Rat   492 AVHAGRLP--RGVKHVKDLPIRPGETFKYRWTLTAEDGPARSDARCVTRYYASAVDPERDLASGL 554

  Fly   229 AGPLVVRMPPKLNPHAH-------------LYDFDMSEHV-------------IMIQDWVHNFVE 267
            .|||::.....::...:             ::|.:.|.::             :.:||     .|
  Rat   555 IGPLLICCKESVDQRGNQMMSDERNVILFSVFDENRSWYISENMRRFLPDEAHVQLQD-----PE 614

  Fly   268 SVAENIL--ING---RGRNLK-----------KGVKAAKPTLYAHFPVVRGGRYRFRVIF----- 311
            ..|.|::  |||   ....|:           ..|.|....|...|   .|..:|.|.::     
  Rat   615 FEASNLMHSINGYVFDSLELRVCLHEVAAWHVLSVGAQTDFLSVFF---SGHTFRHRAVYADTLT 676

  Fly   312 ----NGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIM-----------FHGAERFDFV---- 357
                :||:   :..|:|...:.|:.....|.....:..::           ::| |.::.|    
  Rat   677 VFPHSGVT---VFMSMDNPGVWVLGCHNPDFRESGMTALLKVSSCDEGVSDYYG-ETYEGVLAPL 737

  Fly   358 -----------------LHANQEVSN---------------YWIRVKGYSFCAKNQLHQEAVLHY 390
                             ||:.::.||               :|...:|....|.::.|..|..|.
  Rat   738 ANDNAVDPRSFSQNSNHLHSRKKKSNTPMRFPLSHPTQHGSFWSDSQGDVHDAVHRAHSPAAAHS 802

  Fly   391 RDADTRALDTHTLSYAYDAPGKTLNELGDDASGARAGNSISLANLNAQRPEPEVAPSVT 449
            .:....|.......:    ||:   ::....|..||..|: :..:.|:|.:.::...|:
  Rat   803 NEGPAEAAQLEPKPH----PGE---KMALPPSWLRAKRSL-VTTMEAKRKKLDLQVQVS 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 SufI 131..624 CDD:441735 79/435 (18%)
F8NP_899160.2 Cupredoxin 22..199 CDD:473140
Cupredoxin 212..336 CDD:473140
Cupredoxin 387..563 CDD:473140 46/194 (24%)
Cupredoxin 576..718 CDD:473140 24/152 (16%)
FYDLN_acid <1546..1610 CDD:450301
Cupredoxin 1622..1785 CDD:473140
Cupredoxin 1799..1942 CDD:473140
FA58C 1950..2094 CDD:238014
FA58C 2103..2251 CDD:238014
Blue background indicates that the domain is not in the aligned region.

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