DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and F21D5.3

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001255321.1 Gene:F21D5.3 / 177680 WormBaseID:WBGene00009008 Length:743 Species:Caenorhabditis elegans


Alignment Length:641 Identity:145/641 - (22%)
Similarity:241/641 - (37%) Gaps:164/641 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 DDCKYADGLESEVMVVNGQLPGMNIEVCYGDTVVADVINS-MHETTTIHWHGMHQRLTPFMDGVP 189
            :|....|||...|:.:||.:||..:.|.|...|...|.|. :.::.|||.||:.:....:||||.
 Worm   104 EDVLVVDGLHKRVISINGDMPGAPVVVPYMSEVWIRVSNQILMDSMTIHVHGIDKHGMWYMDGVA 168

  Fly   190 HVTQYPIEAGQAFRYRFEVDHGGTNWWHSHTEHQRAFGLAGPLVV-----RMPPKLNPHAHLYDF 249
            .|.|.||::...|.|||..|:.||:|:|.|.:..|..|:||..:|     ...|.|:....:  .
 Worm   169 FVQQCPIQSTNKFEYRFIADNKGTHWYHGHMQTDRGDGIAGGFIVVDQNDTSVPTLDDRKRI--V 231

  Fly   250 DMSEHVIMIQDWVHNFVESV--------------------------------------AENILIN 276
            ...|:..::|||.....|..                                      ...||:|
 Worm   232 PSREYFFLLQDWATKVGEEAWMQLEDKTMKWMYGYDDFTKCWEPTRTSDGGNVGGAVPISAILLN 296

  Fly   277 GRGRNLKKGVKAAKPTL-YAHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEP 340
            .:|......:|:....| ...|.:.......||::..||:. .:...::.|.:.|:|:||:::.|
 Worm   297 DKGWYDHDIIKSQPFNLPLERFQIKPNEDILFRIVNGGVAQ-ELMLYVEGHPMTVVAADGDEVVP 360

  Fly   341 VEVQRIMFHGAERFDFVLH--ANQEVSNYWIRVK----------------GYSF----------- 376
            ::|.|::....||:|.::.  |.....:|.|:|:                |:.:           
 Worm   361 MKVDRLIVFPGERYDILIKGLATPTKKSYRIQVETVQKYFFDWKEIPIVYGFGYIEYETDGLPED 425

  Fly   377 -CAKNQLHQE-------AVLHYRDADTRALDTHTLSYAYDAPGKTLNELGDDASGARAGNSISLA 433
             ...|.:|.|       .||:....:..|....| ..:||                      .|.
 Worm   426 KTTPNLMHPECTQNKKCTVLNCPFQEWMAQPNFT-CISYD----------------------KLE 467

  Fly   434 NLNAQRPEPEVAPSVTFYTSMNAFEVRQGEGF-----RFQMDDISFSMP------KMSLLQTRNL 487
            |.|.::.|.|:..:..|   ...||    |.|     ..|||...|..|      ....::|.:.
 Worm   468 NPNPEKIEAEILQATQF---NGGFE----EHFINMHHDSQMDQFLFQFPWGIPYYHDGDMETIST 525

  Fly   488 GVGQFFCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVISSL-------SQTPHPIHLHGYT 545
            ...|..|..:..:||...||     |...::...|..|:..:.::       :...||.||||:.
 Worm   526 SCSQTACANNSMSDLDTTCR-----CFYHLEHKLNNIVQITLYNMGLGGAMGTGYAHPFHLHGHH 585

  Fly   546 FRVVGMGVLGEQKIGQIEQIDKKTPLPRR-----------------------AKGAPLKDSVQVP 587
            |.|:.:|.......|.|:|:::....|.|                       .|....:|::.:|
 Worm   586 FYVMKVGWPSYNGSGFIDQMNQDIDCPGRDVSCNGKKWRNKDWLGGALEAMNTKNPTKRDTITLP 650

  Fly   588 AFGYTILRFYSNSPGYWMFHCHISPHSENGMAAVVRVGEDVEMKMCPVS---NCGL 640
            ..||..:||.:.:||:|..|||:..|...|.....:||:..::.|.|.:   :||:
 Worm   651 VGGYITIRFRAVNPGWWFAHCHLELHLMGGTGYAYKVGDQNQIYMPPDNFPHDCGV 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 139/616 (23%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 41/108 (38%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 37/212 (17%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 46/200 (23%)
F21D5.3NP_001255321.1 CuRO_1_tcLCC2_insect_like 110..213 CDD:259927 40/102 (39%)
PLN02191 116..708 CDD:177843 141/629 (22%)
CuRO_3_tcLLC2_insect_like 500..696 CDD:259972 46/200 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167260
Domainoid 1 1.000 87 1.000 Domainoid score I5086
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I2375
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58299
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - otm14491
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - LDO PTHR11709
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X253
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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