DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and LOC105947258

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_012817811.2 Gene:LOC105947258 / 105947258 -ID:- Length:408 Species:Xenopus tropicalis


Alignment Length:34 Identity:11/34 - (32%)
Similarity:15/34 - (44%) Gaps:12/34 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 CAKNQLHQEAVLHYRDADTRALD---THTLSYAY 407
            |.:.|:.|..|         .||   |.|::|||
 Frog   366 CQEQQVTQRTV---------QLDCGGTSTMNYAY 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 11/34 (32%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 4/12 (33%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972
LOC105947258XP_012817811.2 GHB_like 333..398 CDD:419725 11/34 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D257925at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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