DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco4 and hephl1b

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_021335184.1 Gene:hephl1b / 101886332 ZFINID:ZDB-GENE-091204-388 Length:1122 Species:Danio rerio


Alignment Length:464 Identity:82/464 - (17%)
Similarity:148/464 - (31%) Gaps:129/464 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 PGMNIEVCYGDTVVADVINSMHETTTIHWHGMHQRLTPF-----MDGVPHVTQYPIEAGQAFRYR 205
            |.:..||  |||:....:|......:|..||: |...||     .||:.. ..|.::.|:.|.|.
Zfish   474 PVLRAEV--GDTLQVMFMNKADRNYSIQPHGL-QYDKPFEGVFYQDGIKR-KGYEVQPGETFTYM 534

  Fly   206 FEVDHGGTN----------WWHSHTEHQRAFGLAGPLVVRMPPKLNPHAHLYDFDMSEHVIMIQD 260
            :::..|.:.          :..|........||||||:|.....|.......:.| .|..::...
Zfish   535 WKLREGPSESDPPCISYLYFSSSDAVRDTNSGLAGPLLVCKKDALTSSGTQKEVD-HEFFLLFTV 598

  Fly   261 WVHNFVESVAENILINGRG----RNL----KKGVKAAKPTLYAHFP---VVRGGRYRFRVIFNGV 314
            :..|....:.:||...|..    .||    ...:.|....:|.:.|   :.:|.|.|:.::..|.
Zfish   599 FNENLSWYLDQNIETFGTNESDPENLDFQESNKMHAVNGFMYGNLPGLEMNKGSRVRWHLLGLGT 663

  Fly   315 SNCPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHGAERFDFVLHANQEVSNYWIRVKGYSFCAK 379
            .                         :::..|.|.|                             
Zfish   664 E-------------------------MDIHGIYFQG----------------------------- 674

  Fly   380 NQLHQEAVLHYRDADTRALDTHTLSYAYDAPGKTLNELGDDASGARAGNSI----------SLAN 434
            |...::...|    ||.:|..||....:..|         |.||....:.:          .|..
Zfish   675 NTFEKQGTTH----DTLSLFPHTAVTVFMQP---------DVSGVFELSCLVWDHYDSGMRQLYE 726

  Fly   435 LNAQR-PEPEVAPS--VTFYTSMNAFEVRQGEGFRFQMDDISFSMPKMSLLQTRNLGVGQF---- 492
            :...| .||.|:||  |.::.|....|........:::.:.:.:..:..:.....:|:..|    
Zfish   727 VTGPRYEEPSVSPSETVEYFISAEELEWDYSPDRTWELQNFNTTEDERQVCAIAFVGIAVFEWLL 791

  Fly   493 ---FCNRSQQADLGFNCRQRHCQCSNVIQVPANQQVEFVI-SSLSQTPHPIHLHGYTFRVVGMGV 553
               ||.......:|....:...:...|:.   .:..:... :.:.:.||..||     .::|..:
Zfish   792 KPHFCLSPGSLFVGTGGNKLGSKYKKVVY---REYTDATFRTRIEREPHETHL-----EILGPMI 848

  Fly   554 LGEQKIGQI 562
            ..|  :||:
Zfish   849 RAE--VGQV 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 82/464 (18%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 27/103 (26%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 18/147 (12%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 14/103 (14%)
hephl1bXP_021335184.1 Cupredoxin 26..208 CDD:327505
Cupredoxin 228..377 CDD:327505
Cupredoxin 392..586 CDD:327505 29/115 (25%)
Cupredoxin 589..727 CDD:327505 30/205 (15%)
Cupredoxin 743..938 CDD:327505 17/123 (14%)
Cupredoxin 953..1093 CDD:327505
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D257925at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.