DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco4 and f8

DIOPT Version :9

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_012825143.1 Gene:f8 / 100493411 XenbaseID:XB-GENE-1019544 Length:1489 Species:Xenopus tropicalis


Alignment Length:554 Identity:109/554 - (19%)
Similarity:180/554 - (32%) Gaps:154/554 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VFTLCL---ISVQIYGIQ--------DASGKRIVSKYERIMQM------YPQLSSGAGESSQWRA 57
            |..:|.   :|:.:.|..        ...|...|.:..|::.:      :...|...||..::..
 Frog   243 VLVICRQKPLSLHVIGFGPHNEVHTISLEGHSFVVRGHRVISLPVTAFTFITASIQPGERGKYNI 307

  Fly    58 AEKDNQRHPCRR--------DCADKQPMTCYYYMVVH-------YDDTMAETCKRYLQSKFRF-- 105
            : ..|..||..|        |||: :.:....:|.||       |:..:.|.......|..|.  
 Frog   308 S-CQNPLHPAGRMSAVAMVQDCAE-ESVKKMRFMDVHDDEDDDYYESDIIEITDYLSPSHVRSHG 370

  Fly   106 KLS---GKEYIDGIALATQLAANDDCKYADGLESEVMVVNGQL---------------PGMNIEV 152
            ||:   .|.||..:.:......:.|    |...|.:..|..:.               .|:...|
 Frog   371 KLNPVIWKHYIAAVEVEWDYVPSKD----DESSSYIKAVFREFTDAQFLHPKVSEHAGTGILGPV 431

  Fly   153 CYGDTVVADVINSMHETTTIHWHGMHQR-------LTPFMDGVPHVTQYPIEAGQAFRYRFEVDH 210
            ..|:  |.|.|..:.:....|.:.||.:       ..|:|.| ..|.:|||...:...|.:.|..
 Frog   432 LRGE--VGDEIKIIFKNLASHPYNMHPQGLRSVSTAEPYMTG-EQVMEYPIYPNETITYIWRVTQ 493

  Fly   211 GG----------TNWWHS--HTEHQRAFGLAGPLVVRMPPKLNPHAHLYDFDMSEHVIMIQDWVH 263
            |.          |..:.|  :|:...|.||.|||::.....|:...:....| .||:::.    .
 Frog   494 GDAPLSSDPRCLTRLYSSSLNTQKDLASGLFGPLLICTKQTLDTRGNQISTD-KEHILVF----F 553

  Fly   264 NFVESVA----ENI-LINGR-GRNLKKGVKAAKPTLYAHFPVVRGGRYRFRVIFNG-VSNCPISF 321
            .|.||::    :|| .|||| |:.:.......:..||.               .|| :.:..:|.
 Frog   554 VFDESLSWYQEKNIKRINGRSGKQISNMNPMKQNLLYT---------------VNGLLDSLHLSM 603

  Fly   322 SIDKHDLVVIASDGNDIEPVEVQRIMFHGAERFDFVL----------HANQEVSNYWIRVK---- 372
            .:::..:..|.|.|.|:..:......|.....:...|          :.:.|.:.:|..|.    
 Frog   604 CVNEVSIWHILSLGPDLLSIRFGGNTFRTDSGYQDTLTLFPMRGETINMDMEKAGHWTIVPLDST 668

  Fly   373 ----------GYSFCAKNQLHQEAVLHYRDADTRALDT----------HTLSYAYDAPGKTLNE- 416
                      ..|.|. |:..:..|..|.|.....|..          |.|............| 
 Frog   669 VEEQGMTVWLSVSKCL-NEQDEFYVYEYEDFTEELLHDIPPPSPRGIHHKLQKPMSIKQNDTEEE 732

  Fly   417 -------LGDDASGARAGNSISLANLNAQRPEPE 443
                   |..:.|||.|    ||:.|:.:.|:.|
 Frog   733 ETFENKNLETENSGAFA----SLSELSEKTPQTE 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 79/395 (20%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 31/136 (23%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 30/167 (18%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972
f8XP_012825143.1 Cupredoxin 21..193 CDD:302766
Cupredoxin 205..325 CDD:302766 14/82 (17%)
Cupredoxin 377..532 CDD:302766 35/161 (22%)
Cupredoxin 545..683 CDD:302766 28/157 (18%)
Cupredoxin 850..1007 CDD:302766
Cupredoxin 1021..1175 CDD:302766
FA58C 1180..1328 CDD:214572
FA58C 1183..1327 CDD:238014
FA58C 1332..1486 CDD:214572
FA58C 1336..1485 CDD:238014
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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