DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco4 and f5

DIOPT Version :10

Sequence 1:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_002935820.2 Gene:f5 / 100135376 XenbaseID:XB-GENE-987398 Length:2011 Species:Xenopus tropicalis


Alignment Length:501 Identity:97/501 - (19%)
Similarity:174/501 - (34%) Gaps:171/501 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 QRLTPFMDG-----VPHVTQYPIEA-----GQAFRY------RFEVDHGGTNWWHSHTEHQRAFG 227
            ::|.|:.:.     :|:.|.:.:|.     |.:..|      ..::|...|.   |.||.:..||
 Frog  1135 EKLIPYFNDSNLNLLPNRTSHSLEESKLPNGNSNNYGNQTAATRDIDSPETK---SDTEFRELFG 1196

  Fly   228 ---LAGPLVVRMPPKLNPHAHLYDFDMSEHVIMIQDWVHNFVESV--AENILINGRGRNLKKGVK 287
               ..|.:.|....|     .:.:.:|.:|::..:    |..|||  ..:.|.|.:   .::...
 Frog  1197 QQIFEGIMQVIFYQK-----EVNETNMEQHLVTEE----NSTESVQNESHTLFNNK---TQEEQN 1249

  Fly   288 AAKPTLYAHFPVVRGGRYR-----FRVIFN-----GVSNCPIS--------FS------------ 322
            |.|||  ..:..||..|||     .|::..     |..|..:|        ||            
 Frog  1250 AKKPT--KRYFQVRPIRYRTSSNETRMLTRRKKRLGNVNGSLSNDTGNDGVFSPRGMRPQIIIGL 1312

  Fly   323 --IDKHDLVVIASDGNDIEPVEVQRIMFHGAERFDFVLHANQE--VSNYWIRVKGYSFCAKNQLH 383
              :|:.|.|.:..|..| |.|.::::.:....:.:...:.|.:  :..|...:||    .|.:  
 Frog  1313 PGLDEGDYVELNVDEID-EDVHIKKVEYEELYKTEAQEYTNPDKIIQQYLRSLKG----KKRK-- 1370

  Fly   384 QEAVLHYRDADTRALDTHTLSYAYDAPGKTLNELGDDASGARAGNSISLANLNAQRPEPEVAPSV 448
                 :|..|:....|       |..|.|                    ::|..:||:.|.  ..
 Frog  1371 -----YYITAEEEQWD-------YYNPAK--------------------SSLTKERPDSET--RT 1401

  Fly   449 TFYTSMNAFEVRQGEGFRFQMDDISFSMPKMSLLQTRNLGVGQFFCNRSQQADLGFNCRQRHCQC 513
            |.||.:.         || |..|.|||.|.:......:||:            ||          
 Frog  1402 TQYTKVR---------FR-QYLDSSFSKPDVQGEYEEHLGI------------LG---------- 1434

  Fly   514 SNVIQVPANQQVEFVISSLSQTPHPIHLHGYTFRVVGMGVLGEQKIGQIEQIDKKTPLPRRAKGA 578
             .||:...:..::....:|:..|:.:|.||.::          :|..:..|.|..||...:    
 Frog  1435 -PVIRAEVDDIIQITFKNLASRPYSLHAHGVSY----------EKSSEGFQYDDGTPDWLK---- 1484

  Fly   579 PLKDSVQVPAFGYTILRF--YSNSP-------GYWMFHCHISPHSE 615
              ||....|...||.:.:  :.::|       ..|:::..::|..:
 Frog  1485 --KDDAVKPGETYTYVWYATHQSAPENEGSDCRTWIYYSGVNPEKD 1528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco4NP_573249.1 SufI 131..624 CDD:441735 97/501 (19%)
f5XP_002935820.2 CuRO_1_FV_like 32..192 CDD:259888
CuRO_2_FV_like 204..326 CDD:259995
CuRO_3_FV_like 348..514 CDD:259992
CuRO_4_FV_like 527..666 CDD:259996
PTZ00112 775..>1084 CDD:240274
235kDa-fam <938..>1249 CDD:130673 25/128 (20%)
CuRO_5_FV_like 1368..1543 CDD:259993 46/246 (19%)
CuRO_6_FV_like 1555..1694 CDD:259997
FA58C 1702..1849 CDD:238014
FA58C 1857..2008 CDD:238014
Blue background indicates that the domain is not in the aligned region.

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