back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG32488 and Lhpp

DIOPT Version :9

Sequence 1:	NP_001286926.1	Gene:	CG32488 / 326220	FlyBaseID:	FBgn0052488	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_083885.1	Gene:	Lhpp / 76429	MGIID:	1923679	Length:	270	Species:	Mus musculus

Alignment Length:	293	Identity:	64/293 - (21%)
Similarity:	119/293 - (40%)	Gaps:	43/293 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 LSTFESVILDADGVLWHFS----KAIDGAVDTFNYMNTTGRKIFIISNNSEISRQEMADKAKGFG 81
            |:....|:||..|||...|    .||.|:|:....:..:..|:...:|.|:.|.:|:....:..|
Mouse     8 LTGVRGVLLDISGVLCDSSASGATAIAGSVEAVARLKQSPLKVRFCTNESQKSLRELVGVLQQLG 72

  Fly    82 IEIKEDNVLTSSFSCANFLAVKNFQKKVFVMGEKGVHFELEKFGICSLKMSEKLEKPMHEFVTEL 146
            .:|.|:.|...:.:....|..:..:..:.:  .:||..|.:                      ::
Mouse    73 FDISEEEVTAPAPATCQILKERGLRPHLLI--HEGVRSEFD----------------------DI 113

  Fly   147 ELDPDVGAVIVGRDEGFNMAKLVRTGSYLL---NPDVIFLGTCLDAAYPIGNNRVMVGAGATLAA 208
            ::......||....|.|:...:.|....|:   ||.:|.||   ...|....:.:|:..|..:.|
Mouse   114 DMSNPNCVVIADAGEAFSYQNMNRAFQVLMELENPVLISLG---KGRYYKETSGLMLDVGGYMKA 175

  Fly   209 MKAYTGRSPLVLGKPNPWMASTLMQSGAIKPETTLMVGDTLQTDMHFASNCGFQSLMVGSGVNTP 273
            ::...|....|:|||:|....:.:|:..::....:|:||.:..|:..|..||.::|.|.:|...|
Mouse   176 LEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAIMIGDDIVGDVGGAQQCGMRALQVRTGKFRP 240

  Fly   274 KEVQQIIEEGDPKKKILVPDTYLPSLGHMLEFL 306
                     ||.....:..|.|:.:|...::.|
Mouse   241 ---------GDEHHPEVQADGYVDNLAEAVDLL 264

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.