back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG32488 and lhpp

DIOPT Version :9

Sequence 1:	NP_001286926.1	Gene:	CG32488 / 326220	FlyBaseID:	FBgn0052488	Length:	307	Species:	Drosophila melanogaster
Sequence 2:	NP_001092251.1	Gene:	lhpp / 100073345	ZFINID:	ZDB-GENE-070615-43	Length:	270	Species:	Danio rerio

Alignment Length:	304	Identity:	64/304 - (21%)
Similarity:	116/304 - (38%)	Gaps:	75/304 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 QWLSTFESVILDADGVLWHF----SKAIDGAVDTFNYMNTTGRKIFIISNNSEISRQEMADKAKG 79
            ::|.:.:.||||..|||:..    .:||.|:|:....:..:|..:...:|.::.:|:....|.:.
Zfish     8 EFLKSVKGVILDMCGVLYDSGEGGGRAIHGSVEAVKRLMDSGLMLRFCTNETQNTRERFVQKLRV 72

  Fly    80 FGIEIKEDNVLTSSFSCANFLAVKNFQKKVFVMGEKGVHFE---------------LEKFGICSL 129
            .|.:|...:|.:.:.:....|..::.:..:.|..:....|:               .|||...:|
Zfish    73 MGFDISVSHVFSPAPAVVQILQKRHLRPHLLVHDDLIPEFDGVDTSSPNCVVIGDAAEKFSYQNL 137

  Fly   130 KMSEK----LEKPMHEFVTELELDPDVGAVIVGRDEGFNMAKLVRTGSYLLNPDVIFLGTCLDAA 190
            ..:.:    ||||:.                      |::.:    |.|....|    |..||
Zfish   138 NEAFRVLIGLEKPVL----------------------FSLGR----GRYYKETD----GLKLD-- 170

  Fly   191 YPIGNNRVMVGAGATLAAMKAYTGRSPLVLGKPNPWMASTLMQSGAIKPETTLMVGDTLQTDMHF 255
                       .|..:.|::........|:|||:.....|::....::|...:||||.|..|:..
Zfish   171 -----------VGVYMKALEYACDVQAEVVGKPSSEFFKTVLNDMNLQPHEVVMVGDDLVNDVGG 224

  Fly   256 ASNCGFQSLMVGSGVNTPKEVQQIIEEGDPKKKILVPDTYLPSL 299
            |.:||.:.|.|.:|...|.      :|.||..:   .|.|:..|
Zfish   225 AQSCGMKGLQVRTGKYRPS------DECDPSVR---ADAYVDDL 259

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.