DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sk2 and cerk

DIOPT Version :9

Sequence 1:NP_647762.3 Gene:Sk2 / 326219 FlyBaseID:FBgn0052484 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001099056.1 Gene:cerk / 558496 ZFINID:ZDB-GENE-041210-210 Length:649 Species:Danio rerio


Alignment Length:399 Identity:104/399 - (26%)
Similarity:155/399 - (38%) Gaps:129/399 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 VTKHSNFAIEFLSTRC-LDAWCCVVAVGGDGLFHEIVNGLLQR--QDWA--------HVLP-HLA 305
            ||:|:|.|.:.|.... |..:..||.|||||:|.||::||:.|  ||..        .::| .|.
Zfish   264 VTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLR 328

  Fly   306 LGIIPCGSGNGLARSIAHCY-----NEPYFSKPVLGAALTVISGRSSPMDVVRVQLQSRSL-YSF 364
            :||||.||.:.:      ||     |:|..|      ||.::.|.|.||||..|....|.| ||.
Zfish   329 IGIIPAGSTDCI------CYATVGSNDPVTS------ALHMVVGDSQPMDVCSVHSDDRFLRYSV 381

  Fly   365 LSIGWGLISDVDIESERIRMLGYQRFTVWTLYRLVNLRTYNGRISYLLTDHEVSSTHSATGYAAQ 429
            ..:|:|...||..:|||.|.:|..|:.:..:...::.|.|.|.:|:|..:..:.:...       
Zfish   382 SLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRD------- 439

  Fly   430 RRMQSSRSCNTHIDMLNGPAPIYHSSAEYLPQEFADVISLETSINQSFRSRCDSWLSGGSRRSFY 494
             ::|....|                                        |.|        |||  
Zfish   440 -KVQCRSGC----------------------------------------SIC--------RRS-- 453

  Fly   495 YSISESIYHSLADESEFAGLAAASLENRQQNYGPASELPDLNEPLSEDQGWLVEEGEFVMMHAVY 559
               |.....|..||:..:.:                   |..:.      |.|..|:|:.::|  
Zfish   454 ---SSDKLLSKEDEASVSDV-------------------DCRDT------WTVIRGKFLAINA-- 488

  Fly   560 QTHLGIDCHFAPK-----AQLNDGTIYLILIRAGISRPHLLSFLYNMSSGTHLPESHD-DHVKVL 618
             .::...|..:||     |.|.|||..|||:|. .||   :.||.::...|:..:..| ..|:|.
Zfish   489 -ANMSCACPRSPKGLSPSAHLADGTTDLILVRK-CSR---VDFLRHLLRHTNKKDQFDHSFVEVY 548

  Fly   619 PVRAFRLEP 627
            .|:.||..|
Zfish   549 RVKQFRFTP 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk2NP_647762.3 PLN02958 <213..639 CDD:215517 104/399 (26%)
DAGK_cat 216..354 CDD:279163 43/117 (37%)
cerkNP_001099056.1 PLN02204 <263..627 CDD:215126 104/399 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579705
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1597
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D681139at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R653
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.780

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