DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sk2 and sphk1

DIOPT Version :9

Sequence 1:NP_647762.3 Gene:Sk2 / 326219 FlyBaseID:FBgn0052484 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001016918.1 Gene:sphk1 / 549672 XenbaseID:XB-GENE-1015643 Length:509 Species:Xenopus tropicalis


Alignment Length:536 Identity:170/536 - (31%)
Similarity:239/536 - (44%) Gaps:111/536 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 DGGDVSAFLYVFAYVLKKRSLRSELHRERTVLTLRFRSFDTFEDNMREADRWYRSLRWQLHRTLE 202
            |..::..:|......|:..:|...::|:|...|.|.......|.|...|..|...: |::   .|
 Frog    71 DPTELGGYLTAAFCPLRGEALGKTIYRQRVSRTFRIEVSRDKEHNFNVAKTWANRI-WEM---AE 131

  Fly   203 EIFVAPTVDERRRRVLVLLNPKSGSGDAREVFNMHVTPVLNEAEVPYDLYVTKHSNFAIEFLSTR 267
            |.....::....||.||||||.:|:|.|...|..||.|.|.||...:.|..|:....|.|.:...
 Frog   132 EQGPPSSILPPSRRFLVLLNPFAGTGKASGHFQTHVIPTLTEANATFTLLETERPKQAQELVRDE 196

  Fly   268 CLDAWCCVVAVGGDGLFHEIVNGLLQRQDWAHVLPHLALGIIPCGSGNGLARSIAHCYNEPYFS- 331
            .|..|..:|.:.||||..|:||||::|.|||..:.. .|.::|.||||.||.|::      |:| 
 Frog   197 DLSGWDAIVVMAGDGLLFEVVNGLMERPDWACAIKK-PLAVLPGGSGNALAASVS------YYSG 254

  Fly   332 -KPVLGAAL------TVISGRSSPMDVVRVQLQS-RSLYSFLSIGWGLISDVDIESERIRMLGYQ 388
             |...|..|      .:..|:..|:|:|.:...| |.::||||..|||||||||||||.|.:|..
 Frog   255 HKQASGTKLLNNCTFILCKGQPVPLDLVSLTTSSGRRIFSFLSFAWGLISDVDIESERYRFMGSA 319

  Fly   389 RFTVWTLYRLVNLRTYNGRISYLLTDHEVSSTHSATGYAAQRRMQSSRSCNTHIDMLNGPAPIYH 453
            ||:..|..||..||||.||:|||                                    ||   .
 Frog   320 RFSFGTFVRLTALRTYRGRLSYL------------------------------------PA---R 345

  Fly   454 SSAEYLPQEFADVISLETSINQSFRSRCDSWLSGGSRRSFYYSISESIYHSLADESEFAGLAAAS 518
            :|.:..|:                                    |:|..|:|          .:|
 Frog   346 TSPDSTPE------------------------------------SDSHRHNL----------NSS 364

  Fly   519 LENRQQNYGPASELPDLNEPLSEDQGW-LVEEGEFVMMHAVYQTHLGIDCHFAPKAQL-NDGTIY 581
            .:....|....|.|..||||:...  | .|.|.:||::..:||:|||.|...||..|. .:|.:.
 Frog   365 TDTVNPNVLEDSLLVPLNEPVPPH--WTTVTEDQFVLVLLLYQSHLGADLFTAPMVQSPGEGVMQ 427

  Fly   582 LILIRAGISRPHLLSFLYNMSSGTHLPESHDDHVKVLPVRAFRLEPYDNHGIITVDGERVEFGPL 646
            |....:.|||..||.....|..|:|:.|| ..|:..:||.||||||.:|.||:|||||.:....|
 Frog   428 LFYATSRISRASLLKLFLGMEKGSHMGES-IPHITNVPVTAFRLEPLENVGIMTVDGESIPCCSL 491

  Fly   647 QAEVLPGIARVM-VPK 661
            |.::..|:.|:: :|:
 Frog   492 QGQIHKGLGRIISIPQ 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk2NP_647762.3 PLN02958 <213..639 CDD:215517 148/436 (34%)
DAGK_cat 216..354 CDD:279163 55/145 (38%)
sphk1NP_001016918.1 PLN02958 100..484 CDD:215517 157/482 (33%)
DAGK_cat 145..284 CDD:279163 55/145 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 172 1.000 Domainoid score I3683
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39748
Inparanoid 1 1.050 287 1.000 Inparanoid score I2769
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561206at33208
OrthoFinder 1 1.000 - - FOG0001465
OrthoInspector 1 1.000 - - mtm9501
Panther 1 1.100 - - O PTHR12358
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X918
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.070

Return to query results.
Submit another query.