DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sk2 and sphk-1

DIOPT Version :9

Sequence 1:NP_647762.3 Gene:Sk2 / 326219 FlyBaseID:FBgn0052484 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001022017.1 Gene:sphk-1 / 183197 WormBaseID:WBGene00007918 Length:473 Species:Caenorhabditis elegans


Alignment Length:446 Identity:134/446 - (30%)
Similarity:211/446 - (47%) Gaps:82/446 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 PTVDERRRRVLVLLNPKSGSGDAREVFNMHVTPVLNEAEVPYDLYVTKHSNFAIEFLSTRC-LDA 271
            |..::.|..:||.:||.||:|.:.|.|...|.|.|:::.:.|::.||...|.|...|.|:. |..
 Worm    79 PPQEQCRGNLLVFINPNSGTGKSLETFANTVGPKLDKSLIRYEVVVTTGPNHARNVLMTKADLGK 143

  Fly   272 WCCVVAVGGDGLFHEIVNGLLQRQDWAHVLPHLALGIIPCGSGNGLARSIAHCYNEPYFSKPVLG 336
            :..|:.:.||||..|.:||:|.|:|...:.|.|.:||:|.||||||..|:...|......|.|:.
 Worm   144 FNGVLILSGDGLVFEALNGILCREDAFRIFPTLPIGIVPSGSGNGLLCSVLSKYGTKMNEKSVME 208

  Fly   337 AALTVISGRSSPMDVV---RVQLQSRSLYSFLSIGWGLISDVDIESERIR-MLGYQRFTVWTLYR 397
            .||.:.:..::..:.|   .|:..::|..|||||||||::|:||:||:.| .||:.||||....|
 Worm   209 RALEIATSPTAKAESVALYSVKTDNQSYASFLSIGWGLMADIDIDSEKWRKSLGHHRFTVMGFIR 273

  Fly   398 LVNLRTYNGRISYLLTDHEVSSTHSATGYAAQRRMQSSRSCNTHIDMLNGPAPIYHSSAEYLPQE 462
            ..|||:|.||::|                                             ..|.|:.
 Worm   274 SCNLRSYKGRLTY---------------------------------------------RPYKPKG 293

  Fly   463 FADVISLETSINQSFRSRCDSWLSGGSRRSFYYSISESIYHSLADESEFAGLAAASLENRQQNYG 527
            |....::.:...::.:.|.|.     |:.....|:|:|       |.|       ::|.:.||: 
 Worm   294 FHPSSNVFSVYEKTTQQRIDD-----SKVKTNGSVSDS-------EEE-------TMETKFQNW- 338

  Fly   528 PASELPDLNEPL----SEDQGWLVEEGEFVMMHAVYQTHLGIDCHFAPKAQLNDGTIYL--ILIR 586
               .|||.:|.|    |:.:..:|.|..||.::||..:|:..|..|||.|:|.|..|:|  ||.:
 Worm   339 ---TLPDSDETLAVGSSDLEETVVIEDNFVNIYAVTLSHIAADGPFAPSAKLEDNRIHLSYILWK 400

  Fly   587 AGISRPHLLSFLYNMSSGTHLPESHDDHVKVLPVRAFRLEPYDNHGIITVDGERVE 642
            ...:|.::..:|..:...|||......||:   |.:.:||.......:.:|||.|:
 Worm   401 DIGTRVNIAKYLLAIEHETHLDLPFVKHVE---VSSMKLEVISEGSHVVLDGEVVD 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk2NP_647762.3 PLN02958 <213..639 CDD:215517 130/436 (30%)
DAGK_cat 216..354 CDD:279163 49/141 (35%)
sphk-1NP_001022017.1 DAGK_cat 88..>189 CDD:279163 40/100 (40%)
LCB5 89..469 CDD:224513 132/436 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158680
Domainoid 1 1.000 115 1.000 Domainoid score I3774
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 204 1.000 Inparanoid score I2443
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561206at33208
OrthoFinder 1 1.000 - - FOG0001465
OrthoInspector 1 1.000 - - otm14570
orthoMCL 1 0.900 - - OOG6_101566
Panther 1 1.100 - - O PTHR12358
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X918
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

Return to query results.
Submit another query.