DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sk2 and Sphk1

DIOPT Version :9

Sequence 1:NP_647762.3 Gene:Sk2 / 326219 FlyBaseID:FBgn0052484 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001257740.1 Gene:Sphk1 / 170897 RGDID:620048 Length:458 Species:Rattus norvegicus


Alignment Length:442 Identity:135/442 - (30%)
Similarity:198/442 - (44%) Gaps:107/442 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 RVLVLLNPKSGSGDAREVFNMHVTPVLNEAEVPYDLYVTKHSNFAIEFLSTRCLDAWCCVVAVGG 280
            ||||||||:.|.|.|.::|...|.|:|.||||.:.|.:|:..|.|.|.:....|..|..:..:.|
  Rat    91 RVLVLLNPRGGKGKALKLFQSRVRPLLEEAEVSFKLMLTERQNHARELVCAEELGHWDALAVMSG 155

  Fly   281 DGLFHEIVNGLLQRQDWAHVLPHLALGIIPCGSGNGLARSIAHCYNEPYFSKP--VLGAALTVIS 343
            |||.||:||||::|.||...: ...|..:|.||||.||.|:.:.......:..  ::...|.:..
  Rat   156 DGLMHEVVNGLMERPDWESAI-QKPLCSLPGGSGNALAASLNYYAGHEQVTNEDLLINCTLLLCC 219

  Fly   344 GRSSPMDVVRVQLQS-RSLYSFLSIGWGLISDVDIESERIRMLGYQRFTVWTLYRLVNLRTYNGR 407
            .:.|||:::.:...| |.|||.||:.||.::|||:|||:.|.||..||||.|.:||.:||.|.|:
  Rat   220 RQLSPMNLLSLHTASGRQLYSVLSLSWGFVADVDLESEKYRSLGEIRFTVGTFFRLASLRIYQGQ 284

  Fly   408 ISYLLTDHEVSSTHSATGYAAQRRMQSSRSCNTHIDMLNGPAPIYHSSAEYLPQEFADVISLETS 472
            ::||           ..|.||.:                                          
  Rat   285 LAYL-----------PVGKAASK------------------------------------------ 296

  Fly   473 INQSFRSRCDSWLSGGSRRSFYYSISESIYHSLADESEFAGLAAASLENRQQNYGPASE-LPDLN 536
                                                     :.|:||..:    |||:. |..|.
  Rat   297 -----------------------------------------IPASSLAQK----GPANTYLVPLE 316

  Fly   537 EPLSEDQGW-LVEEGEFVMMHAVYQTHLGIDCHFAPKAQLNDGTIYLILIRAGISRPHLLSFLYN 600
            ||:...  | :|.|.:||::..:..|||..:...||..:...|.::|..||||:||..||.....
  Rat   317 EPVPPH--WTVVPEQDFVLVLVLLHTHLSTEMFAAPMGRCEAGVMHLFYIRAGVSRAMLLRLFLA 379

  Fly   601 MSSGTHLPESHDDHVKVLPVRAFRLEPYDNHGIITVDGERVEFGPLQAEVLP 652
            |..|.|: :....::..:||.||||||.:..|:.:||||.:....:|.:|.|
  Rat   380 MQKGKHM-DLDCPYLVHVPVVAFRLEPRNQRGVFSVDGELMVCEAVQGQVHP 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk2NP_647762.3 PLN02958 <213..639 CDD:215517 130/427 (30%)
DAGK_cat 216..354 CDD:279163 52/139 (37%)
Sphk1NP_001257740.1 LCB5 91..443 CDD:224513 135/442 (31%)
DAGK_cat 91..197 CDD:279163 48/106 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339908
Domainoid 1 1.000 101 1.000 Domainoid score I6760
eggNOG 1 0.900 - - E1_COG1597
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39748
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D561206at33208
OrthoFinder 1 1.000 - - FOG0001465
OrthoInspector 1 1.000 - - otm46146
orthoMCL 1 0.900 - - OOG6_101566
Panther 1 1.100 - - O PTHR12358
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X918
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.710

Return to query results.
Submit another query.