Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_116647.1 | Gene: | SMC1 / 850540 | SGDID: | S000001886 | Length: | 1225 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1271 | Identity: | 249/1271 - (19%) |
---|---|---|---|
Similarity: | 490/1271 - (38%) | Gaps: | 362/1271 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 GRIHSVYCKDFVSYSEIT---FHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEP----------- 64
Fly 65 ----ILLDRSASVADY-----IQSNKTSATIIVRVYGRTPNTTETFRRIINSNGLSTFSVNDKDT 120
Fly 121 SKKNFLAAVSSFN--IQVSNLCQFLPQDRVQDFSKMNPQEL--LLNTMSSVCD-----EDLINSF 176
Fly 177 NSLKQMRTE----QANVHANREKEKSDLVKKQKRLEHLQMTVSQYKEREEVKQKLQVYSAKKLW- 236
Fly 237 ---VETQAGEA--KAAEMKTQVKNAKTQSDKLKNQHDKLLQSQEQ-------IEKEKESLRKALL 289
Fly 290 EKTRLLEN----AVAEKAA------IDGKMDSL-----KQGIYQKKYE------------LEQNI 327
Fly 328 KKSRR-------TATECDNLNQLVENKIYE--------LETLNKSRPLIVSELERAKESCAAARG 377
Fly 378 KAMEQYS-RRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAMNWLAQNKQ 441
Fly 442 RYKLN--VYDPMIL--ELTVQNHE---DAKFLENVVAQRDLFAFACEDKGDMSDLINELCVKQK- 498
Fly 499 ---LGVNVIYCAPSDRLVYSPKTPIDDLRSF------GFRSYL-VDLVTGPIPLINKLCASYSIH 553
Fly 554 NIP------IGTEAVGNYTSSIPKAIRVYFGGSKKFVVTASRYRSDTILTESSIRAKNQLITVDS 612
Fly 613 QQLALVMK-----------------------------------------QCSEAVKESDSIKNAI 636
Fly 637 TQTDNEFERLQAVAKDEQEKRRKLDQ---KIAHFNSL-----KTEIETLQKKLEALRNS-DSL-- 690
Fly 691 --DCLETN----FCNSLHKDLKKIFDADAEL----CSCLKAIDRLII------------------ 727
Fly 728 -----EKNMAQTKVSIYMLQH------------ETQIEALKE--SEEQSKAATRDFQQLLQCLEN 773
Fly 774 QISDVNKRKSAIQGLCHGEIPTSSKFPFKK----EFRELENIDLPELRE-AIHDFQARLECMKSV 833
Fly 834 NSEAIS-------SYQG----------------LQNEVKQLEEGIQESVNQAKSIESGMSNLYDK 875
Fly 876 WEPK------------------LNSLVETISTKFSEFMESIEYVGEVV------LSKTDKYDFDS 916
Fly 917 YG--IQIMVQ-----FRRGLQLQ---PLDKF----IQSGGERAVSIAIYSLSLQHVTHVPFRCVD 967
Fly 968 EINQGMDATNERHIFDLLLKEATKHGSAQYLFVTPK 1003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 46/172 (27%) |
Smc | 22..1011 | CDD:224117 | 247/1263 (20%) | ||
GrpE | 212..>316 | CDD:295646 | 29/131 (22%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 20/97 (21%) | ||
SMC1 | NP_116647.1 | Smc | 3..1225 | CDD:224117 | 248/1270 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |