Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_598547.1 | Gene: | Smc4 / 70099 | MGIID: | 1917349 | Length: | 1286 | Species: | Mus musculus |
Alignment Length: | 1285 | Identity: | 257/1285 - (20%) |
---|---|---|---|
Similarity: | 453/1285 - (35%) | Gaps: | 395/1285 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ALSSKQLAGR--IHSVYCKDFVSYS-EITFHPKH-YLNVLTGPNGSGKSTIVSAIILGLGGEPIL 66
Fly 67 LDRSASVADYIQSNKTSATI------------IVRV------------YGRTPNTTETFRRIINS 107
Fly 108 NGLSTFSVNDKDTSKKNFLAAVSSFNIQVSNLCQFLPQDRVQDFSKMNPQ--------------- 157
Fly 158 ------------------ELL-------LNTMSSVCDE--------------------------- 170
Fly 171 -------DLINSFNSLKQMR----------TEQANVHANREKEKSDLVKK-QKRLEHLQMTVSQY 217
Fly 218 KER--------EEVKQKLQ--VYSAKKLWVETQAGEAKAAEMKTQVKNAKTQSDKLKNQHDKLLQ 272
Fly 273 SQEQIEKEKESLRKALLEKTRLLENAVAEKAAIDGKMDSLK---QGIYQKKYELEQNIKKSRRTA 334
Fly 335 TECDNLNQLVENKIYELETLNKSRPLIVSELERAKESCAAARGKAMEQYSRRRQLEQKL------ 393
Fly 394 ---NDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAMNWLAQNKQRYKLNVYDPMILEL 455
Fly 456 TVQNHEDAKF---------LENVVAQRDLFAFACEDKGD--MSDLIN--ELCV----KQKLGVNV 503
Fly 504 IYCAPSDRLVYSPK-----TPIDDLRSFGFRSYLVDLVTGPIPLINKLCASYSIHNIPIGTEAVG 563
Fly 564 NYTSSIPKAIRVYF------------------------GGSKKFVVTASRYRSDTILTESSIRAK 604
Fly 605 NQL-------------------------------------------------------------- 607
Fly 608 -----ITV--DSQQLALVMKQCSEAVKESDSIKNAITQTDNEFERLQAVAKDEQEKRRKLDQKIA 665
Fly 666 HFNSLKTEIETLQKKLE-----------ALRNSD-SLDCLETNFCNSLHKDL----KKIFDADAE 714
Fly 715 LCSCLKAIDRLIIEKNMAQTKVSIYMLQHETQIEALKESEEQSKAATRDFQQL---LQCLENQIS 776
Fly 777 DVN-------KRKSAIQGLCHGEIPTSSKFPFKKEFRELENIDLPE-LREAIHDFQARLECMKSV 833
Fly 834 NSEAISSYQGLQNEVKQLEEGIQESVNQAKSIESGMSNLYDKWE----PKLNSLVE---TISTKF 891
Fly 892 SEFMESIEYVGEVVLSKTDKYDFDSYGIQIMVQFRRGLQLQPLDK-----FIQSGGERAVSIAIY 951
Fly 952 SLSLQHVTHVPFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVT 1001 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 39/206 (19%) |
Smc | 22..1011 | CDD:224117 | 252/1267 (20%) | ||
GrpE | 212..>316 | CDD:295646 | 30/116 (26%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 24/88 (27%) | ||
Smc4 | NP_598547.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..51 | ||
SMC_N | 81..1272 | CDD:308206 | 253/1274 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |