Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651228.1 | Gene: | jnj / 42876 | FlyBaseID: | FBgn0266282 | Length: | 1122 | Species: | Drosophila melanogaster |
Alignment Length: | 1119 | Identity: | 241/1119 - (21%) |
---|---|---|---|
Similarity: | 466/1119 - (41%) | Gaps: | 242/1119 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 GRIHSVYCKDFVSYSE--ITFHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSASVADY 76
Fly 77 IQSNKTSATIIVRV--YGRTPNTTETF-------RRIINSNGLSTFSVND---KDTSKK--NFLA 127
Fly 128 AVSSFNIQVSNLCQFLPQDRVQDFSK-----MNPQELLLNTMSSVCDEDLINSFNSLKQMRTEQA 187
Fly 188 NVHANREKEKSDLVKKQKRLEHL---QMTVSQYKEREEVKQKLQVYSAKKLWVETQAGEAKAAEM 249
Fly 250 KTQVK---NAKTQSDKLKNQHDKLLQSQEQIEKEKESLRKALLEKTRLLENAV--AEKAAIDGKM 309
Fly 310 DSLKQGIYQKKYELEQNIKKSRRTATECDNLNQLVENKIYELETLNKSRPLIVSELERAKESCAA 374
Fly 375 ARGKAMEQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAMNWLAQN 439
Fly 440 KQRYKLNVYDPMILELTVQNHEDAKFLENVVAQRDLFA--------------FACEDKGDMSDLI 490
Fly 491 -NEL--CV----------KQKL---------GVNV--IYCAPSDRLVY-------SPKTP----- 519
Fly 520 IDDLRSFG--FRSYLVDLVTGPIPLI--NKLCASY---SIHNIPIGTEAVGNYTSSIPKAIRVYF 577
Fly 578 GGSKKFVVTASRYRSDTILTESSIRAKNQLITVDSQQLALVMKQCSEAVKESDSIKNAITQTDNE 642
Fly 643 FERLQAVAKDEQEKRRKLDQKIAHFNSLKTEIETLQKKLEALRNSDSLDCLETNFCNSLHKDLKK 707
Fly 708 IFDADAELCSCLKAIDRLIIEKNMAQTKVSIYMLQH-ETQIEALKESEEQSKAATRDFQQLLQCL 771
Fly 772 ENQISDVNKRKSAIQGLCHGEIPTSSKFPFKKEFR-------ELENIDLPELREA------IHDF 823
Fly 824 QARLECMKSVNSEAISSYQGLQNEVKQLEEGIQESVN-QAKSIESGMSNLYDKWEPKLNSL--VE 885
Fly 886 TISTKFSEFMESIEYVGEVVLSKTDKYDFDSYGIQIMVQFRRGLQLQPLDKFIQ----------- 939
Fly 940 ---------------SGGERAVSIAIYSLSLQHVTHVPFRCVDEINQGMDATNERHIFDLLLKEA 989
Fly 990 TKHGSAQYLFVTPK 1003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 49/166 (30%) |
Smc | 22..1011 | CDD:224117 | 239/1111 (22%) | ||
GrpE | 212..>316 | CDD:295646 | 20/108 (19%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 24/111 (22%) | ||
jnj | NP_651228.1 | ABC_SMC6_euk | 99..>248 | CDD:213243 | 46/152 (30%) |
Smc | 115..1084 | CDD:224117 | 229/1081 (21%) | ||
TEX15 | <269..>357 | CDD:291972 | 19/97 (20%) | ||
ABC_SMC6_euk | <1027..1122 | CDD:213243 | 21/76 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45454090 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |