Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_955836.2 | Gene: | smc2 / 321452 | ZFINID: | ZDB-GENE-030131-105 | Length: | 1199 | Species: | Danio rerio |
Alignment Length: | 1282 | Identity: | 248/1282 - (19%) |
---|---|---|---|
Similarity: | 458/1282 - (35%) | Gaps: | 432/1282 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 IHSVYCKDFVSYSEIT----FHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSASVADY 76
Fly 77 IQSNK----TSATIIVRVYGRTPNTTETFRRIINSNGLST---FSVNDKDT---------SKKNF 125
Fly 126 LAAVSSFNIQVSNL-CQ----------FLPQDRVQDFSKMNPQELL------------------- 160
Fly 161 ----------LNTMSSVCDEDLINSFNSLKQMRTEQANVHANREKEKSDLVKKQKRLEHLQMTVS 215
Fly 216 QY----------KEREEVKQKLQVYSAKKLWVETQAGEAKAAEMKTQVKNAKTQSDK-----LKN 265
Fly 266 QHDKL-------LQSQEQIEKEKESLRKALLEKTRLLEN-----------------------AVA 300
Fly 301 E------------------------------KAAIDGKMDSLKQGIYQKKYE----------LEQ 325
Fly 326 NIKKSRRTATECDN-----------LNQLVENKIYELETLNKSRPLIVSELERAKESCAAARGKA 379
Fly 380 MEQYSRRRQLEQK--LNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLVVAMNWLAQNKQR 442
Fly 443 YKLNVYDPMILELTVQNHEDAKFLE--------NVVAQRDLFAFACEDKGDMSDL-----INELC 494
Fly 495 VKQKLGVNVIYCAPSDRLVYSPKTPIDDLRSFGFRSYLVDLVTGPIPLINKLCASYSIHNIPIGT 559
Fly 560 EAVGNYTSSIPKAIRVYFGGSKKFVVTASRYRSDTILTESSIRAKNQLI---TVDSQ-------- 613
Fly 614 -QLALVMKQCSEAVKESDSIKN---AITQTDNEFERLQAVAKDEQEKRRKLDQKIAHFNSLKTEI 674
Fly 675 E-----TLQKKLEALRNSDSLDCLET------------NFCNSLHKDLKKIFDADAELCSCLKAI 722
Fly 723 DRLIIEKNMAQTKVSIYM-----LQHET-----QIEALKES----EEQSKAATRDFQQLLQCLEN 773
Fly 774 QISDVNKRKSAIQGLCHGEIPTSSKFPFKKEF-----REL--ENIDLPELREAIHDFQARLECMK 831
Fly 832 ---------SVNSEA-----------ISSYQGLQNE------------------VKQLEE---GI 855
Fly 856 QESVN-QAKSIESGMSNLYDKWEPKLNSLVETISTKFSEFMESIEYVGEVVLS----KTDKYDFD 915
Fly 916 SY------------------GIQIMVQFRRGL------QLQPLDKFIQSGGERAVSIAIYSLSLQ 956
Fly 957 HVTHVPFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVTPK 1003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 47/174 (27%) |
Smc | 22..1011 | CDD:224117 | 246/1276 (19%) | ||
GrpE | 212..>316 | CDD:295646 | 29/178 (16%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 19/91 (21%) | ||
smc2 | NP_955836.2 | Smc | 1..1170 | CDD:224117 | 248/1282 (19%) |
ABC_SMC2_euk | 1..>156 | CDD:213240 | 44/168 (26%) | ||
L_lactis_ph-MCP | 252..>465 | CDD:115336 | 33/214 (15%) | ||
SMC_hinge | 522..639 | CDD:214944 | 29/167 (17%) | ||
DUF4200 | 740..841 | CDD:290574 | 26/107 (24%) | ||
P-loop_NTPase | <1074..1169 | CDD:304359 | 18/81 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |