Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062684.2 | Gene: | Smc1a / 24061 | MGIID: | 1344345 | Length: | 1233 | Species: | Mus musculus |
Alignment Length: | 1255 | Identity: | 242/1255 - (19%) |
---|---|---|---|
Similarity: | 473/1255 - (37%) | Gaps: | 355/1255 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 GRIHSVYCKDFVSY-SEITFHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSASVADYI 77
Fly 78 QS---NKTSA--TIIVRVYGRTPNTTETFRRIINSNGLSTFSVNDKDTSKKNFLAAVSSFNIQVS 137
Fly 138 --NLCQFLPQDRVQDFSKMNPQELLLNTMSSVCDEDLINSFNSLKQMRTEQANVHANREKEKSDL 200
Fly 201 VKKQKRLE---HLQMTVSQYKEREEVKQ--------------------KLQVYSAKKLWVETQAG 242
Fly 243 EAKAAEMKTQVKNAKTQSDKL-------KNQHDKLLQSQEQIEKE------------------KE 282
Fly 283 SLR---KALLEKTRLLENAVAEKAAIDGKMDSLKQGI---------YQKKYE-----------LE 324
Fly 325 QN-IKK--------SRRTAT---ECDNLNQ----------LVENKIYELETLNKSRPLIVSELER 367
Fly 368 AKESCAAARGKAMEQY--SRRRQLEQ--KLNDEMIPEITAYKLKIERLR---NVKMQKIDEIR-- 423
Fly 424 ----AKNPNLVVAMNWLAQNKQRYKLNVYDPMI--LELTVQNHE-----------DAKFLENVVA 471
Fly 472 QRDLFAFACEDKGDMSDLINELCVKQKLGVNVIYCAPSDRLVYSPKTPIDDLRSFGFRSYLVDLV 536
Fly 537 TGPIPLINKLCASYSIHNIPIGTEAVGNYTSSIPKAIRVYFGGSKKFVVTA---SRYRSDTILT- 597
Fly 598 -ESSIRAKNQ--------LITVDSQQLALVMKQCSEAVKESDSIKNA------------ITQTDN 641
Fly 642 EFERLQAVAKDEQEKRRKLDQKIAHF----NSLKTEIETLQKKLEALRNSDSLDCLE----TNFC 698
Fly 699 NSLHKDLKKIFDADAELCSCLKAIDR---------------LIIEKNMA---QTKVSIY---MLQ 742
Fly 743 HETQIEALKESEEQSKAATRDFQQLLQCLENQ-------ISDVNKRKSAIQGLCHG--------- 791
Fly 792 -EIPT-SSKFPFKKEFR-------ELENIDLPELREAIHDFQARLECMKSVNSEAISSYQ----- 842
Fly 843 ---------------------GLQNEVKQLEEGIQESVNQAKSIESGMSNLYDKWEPKLNSL--V 884
Fly 885 ETISTKFSEFMESIEYV-----------GEVVLSKTDKYD--FDSYGIQIMVQFRR--------- 927
Fly 928 ----------------------GLQLQPLDKFIQSGGERAVSIAIYSLSLQHVTHVPFRCVDEIN 970
Fly 971 QGMDATNERHIFDLLLKEAT 990 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 41/153 (27%) |
Smc | 22..1011 | CDD:224117 | 241/1247 (19%) | ||
GrpE | 212..>316 | CDD:295646 | 32/151 (21%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 18/103 (17%) | ||
Smc1a | NP_062684.2 | SMC_N | 3..1210 | CDD:308206 | 241/1254 (19%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 284..308 | 2/23 (9%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 348..369 | 2/20 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 947..969 | 6/23 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |