Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775360.2 | Gene: | smc4 / 192332 | ZFINID: | ZDB-GENE-020419-21 | Length: | 1289 | Species: | Danio rerio |
Alignment Length: | 1275 | Identity: | 265/1275 - (20%) |
---|---|---|---|
Similarity: | 482/1275 - (37%) | Gaps: | 375/1275 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ALSSKQLAGR--IHSVYCKDFVSYS-EITFHPKH-YLNVLTGPNGSGKSTIVSAI--ILGLGGEP 64
Fly 65 ILLDRSASVADYIQSNK-----TSATIIVRV----------YGRTPNTTETFRRIINSNGLSTFS 114
Fly 115 VNDKDTSKKNFLAAVSSFNIQVSNLCQFLPQDRVQDFSKMNPQ------ELLLNTMSSVCDEDLI 173
Fly 174 NS-------------FNSLKQMRTEQANVHANREKEKS-----------------DLVKKQKRLE 208
Fly 209 H-----LQMTVS-------QYKE------------REEVKQKLQVYSA--KKL-----WVETQAG 242
Fly 243 -----EAKAAEMKTQVKNAKTQSDKLKNQHDKLLQSQEQIEK--------EK----ESLRKALLE 290
Fly 291 KTRLLENAVAEKAAIDGKMDSLKQ---GIYQKKYELEQNIKKSRRTATECDNLNQLVENK--IY- 349
Fly 350 -----ELETLNKSRPLIVSELERAKESCAAARGKAMEQYSRRRQLEQKLNDEMIPEITAYKLKIE 409
Fly 410 RLRNVKMQKIDEIRAKNPNLVVAMNWLAQNKQRYKLNVYDPMILELTVQNHEDAKFLENVVAQRD 474
Fly 475 LFAFACEDKGDMSDLINELCVKQKLGVNVIYCAPSDRLVYSPKTPIDDLRSFGFRSYLVDLVTGP 539
Fly 540 IPLINKLCASYSIHNIPIGT-----------EAVGNYTS--SIPK---AIRVYFGGSKKFVVTAS 588
Fly 589 RYRSDTILT---ESSIRAKNQ------LITVDSQQL----------ALVMK------QCSEAVKE 628
Fly 629 S-DSIKNAITQTDNEFERLQAVAKDEQEKRRKLDQKI------------------AHFNSL---- 670
Fly 671 --------------------KTEIETLQKKLEALR---------------------------NS- 687
Fly 688 ------DSLDCLETNF--CNS-----------LHKDLKKIFDA----DAELCSCLKAIDRLIIEK 729
Fly 730 NMAQTKVSIYMLQHETQIEALKESEEQSKAATRDFQQLLQ---CLENQISDVNKRKSAIQGL--- 788
Fly 789 CHGEIPTSSKFPFKKEFRELENI---DLPELR----------EAIHDFQARLE--C--MKSVNSE 836
Fly 837 AISSYQGLQNEVKQLEEGIQESVNQAKSIESGMSNLYDKWEPKLNSLVETISTKFSEFMESIEYV 901
Fly 902 GEVVLSKTDKYDFDSYGIQIMVQFRRGLQLQPLDK-----FIQSGGERAVSIAIYSLSLQHVTHV 961
Fly 962 PFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVT 1001 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 39/172 (23%) |
Smc | 22..1011 | CDD:224117 | 259/1257 (21%) | ||
GrpE | 212..>316 | CDD:295646 | 40/149 (27%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 23/88 (26%) | ||
smc4 | NP_775360.2 | ABC_SMC4_euk | 81..>240 | CDD:213241 | 36/161 (22%) |
SMC_N | 82..1273 | CDD:280601 | 260/1264 (21%) | ||
DUF4349 | <274..435 | CDD:305044 | 40/163 (25%) | ||
SMC_hinge | 612..726 | CDD:214944 | 26/155 (17%) | ||
MIT_CorA-like | <866..1025 | CDD:294313 | 27/158 (17%) | ||
ABC_SMC4_euk | <1180..1274 | CDD:213241 | 20/73 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |