Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_509956.2 | Gene: | smcl-1 / 183453 | WormBaseID: | WBGene00008085 | Length: | 537 | Species: | Caenorhabditis elegans |
Alignment Length: | 400 | Identity: | 83/400 - (20%) |
---|---|---|---|
Similarity: | 158/400 - (39%) | Gaps: | 101/400 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 RIHSVYCKDFVSYS-EITFHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSASVADYIQ 78
Fly 79 SNKTSATIIVRVYGRTPNTTETFRRIINSNGLS---TFSVNDKDTSKKNFLAAVSSFNIQVSNLC 140
Fly 141 QFLPQDRVQDFSKMNPQELLLNTMSSVCDEDLINSF----NSLKQMRTEQANVHANREKEKSDLV 201
Fly 202 KKQKRLEHLQM------TVSQY------KEREEVKQKLQVYSAKKLWVETQAGEAKAAEMKTQV- 253
Fly 254 ----------------KNAKTQSDKLKNQHDKLLQSQEQIEKEKESLRKALLEKTRLLENAVAE- 301
Fly 302 ----KAAIDG------KMDSLKQGIYQKK---------YE---LEQNIKKSR---------RTAT 335
Fly 336 ECDNLNQLVE 345 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 30/148 (20%) |
Smc | 22..1011 | CDD:224117 | 81/392 (21%) | ||
GrpE | 212..>316 | CDD:295646 | 29/143 (20%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | |||
smcl-1 | NP_509956.2 | ABC_ATPase | 8..>123 | CDD:330224 | 25/120 (21%) |
SMC_N | <112..520 | CDD:330553 | 58/288 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |