Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001288341.1 | Gene: | Smc2 / 14211 | MGIID: | 106067 | Length: | 1191 | Species: | Mus musculus |
Alignment Length: | 1243 | Identity: | 238/1243 - (19%) |
---|---|---|---|
Similarity: | 447/1243 - (35%) | Gaps: | 396/1243 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 IHSVYCKDFVSYSEIT----FHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSASVADY 76
Fly 77 I----QSNKTSATIIVRV---------YGRTPNTTETFRRIINSNGLSTFSVNDKDTSKKNFLAA 128
Fly 129 VSSFNIQVSNLCQFLPQDRVQDFSKMNPQELL-----------------------------LNTM 164
Fly 165 SSVCDEDLINSFNSLKQMRT---EQANV-----HANR--------------EKEKSDLVKKQKRL 207
Fly 208 EHLQMTVSQYKER--------EEVKQKLQVYSAKKL-WVETQAGEAKAAEMKTQ------VKNAK 257
Fly 258 TQSDKLKNQHDKLLQSQEQI-EKEKE---------SLRKALLEKTRLLE------NAVA------ 300
Fly 301 ---EKAAIDGKMDSLKQGIYQKKYELEQNIKKSRRTATECDNLNQLVE--NKIYE-----LETLN 355
Fly 356 KSRPLIVSEL-----ERAKESCAAARGKAMEQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVK 415
Fly 416 MQKIDEIRAKNPNLVVA-----MNWLAQNKQRYK------LNVYD---PMILELTVQNHEDAKFL 466
Fly 467 ENVVAQRDLFAFACEDKGDMS--------DLINELCVKQKLGVNVIYCAPSDRLVYSPKTPIDDL 523
Fly 524 RSFGFRSYLVDLVTGPIPLINKLCASYSIHNIPIGTEAVGNYTSSIPKAIRVYFG--------GS 580
Fly 581 KKFVVTASRYRSDTILTESSIRAKNQLIT--VDSQQLALVMKQCSEAVKESDSIKNAITQTDNEF 643
Fly 644 ERLQ---AVAKDEQEKRRKLDQKIAHFNSLKTEI-ETLQKKLEALRNSDSLDCLETNFCNSLHKD 704
Fly 705 ------LKKIFDADAELCSCLKAIDRLIIEKNMAQTKVSIYMLQHETQIEALKESEEQSKAATRD 763
Fly 764 FQQLLQCLENQISDVNKRKSAIQGLCHGEIPTSSKFPFKKEFRELENIDLPELREAIHDFQARLE 828
Fly 829 CMKSVNSEAISSYQGLQNEVKQLEEGI---QESVNQA-------KSIESGMSNLY-DKW------ 876
Fly 877 -------EPKLNSLVETIS----------TKFSEFMESIEYVG---EVVLSKTDKYDFDSYGIQI 921
Fly 922 MVQFRRGLQLQPLDKFIQSGGERAVSIAIYSLSLQHVTHVPFRCVDEINQGMDATNERHIFDLLL 986
Fly 987 KEATKHGSAQYLFVTPKLLRDLNYNEHLCVSIV-------------------------HNSKTVC 1026
Fly 1027 HGMQFPMA 1034 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 38/160 (24%) |
Smc | 22..1011 | CDD:224117 | 231/1187 (19%) | ||
GrpE | 212..>316 | CDD:295646 | 28/143 (20%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 15/130 (12%) | ||
Smc2 | NP_001288341.1 | Smc | 1..1168 | CDD:224117 | 238/1243 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |