Sequence 1: | NP_996141.2 | Gene: | SMC5 / 326215 | FlyBaseID: | FBgn0052438 | Length: | 1034 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_031816.2 | Gene: | Smc3 / 13006 | MGIID: | 1339795 | Length: | 1217 | Species: | Mus musculus |
Alignment Length: | 1295 | Identity: | 258/1295 - (19%) |
---|---|---|---|
Similarity: | 476/1295 - (36%) | Gaps: | 422/1295 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 IHSVYCKDFVSYSEIT----FHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSASVADY 76
Fly 77 IQSNKTSATIIVRVYGRTPNTTETFRRIINSNGLSTFSVNDKDTS-------KKN--FLAAVSSF 132
Fly 133 NIQVSNLCQFLPQDRVQDFSKMNPQELL----LNTMSS-----------------VCDEDLINSF 176
Fly 177 NSLKQMRTEQANVHA----------NREKEKSDLVKKQ---KRLEHLQMTVSQYKEREEVKQKLQ 228
Fly 229 VYSAKKLWVET------------QAGEAKAAEMKTQVKNAKTQSDKLKNQHDKL-LQSQEQIEK- 279
Fly 280 ----------------EKESLRKALLEKTRLLENAVAEK----AAIDGKMDSLKQ----GI---- 316
Fly 317 ------------------YQKKYELEQNIKKSRRTATECDNLNQLVENKIYELETLNKSRPLIVS 363
Fly 364 ELERAKESCAAARGKAMEQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPN 428
Fly 429 LVVAMN--WLAQNKQRYKLNVYDPMILELTVQNHEDAKFLENVVAQRDLFAFACEDKGDMS--DL 489
Fly 490 INELCVK-QKLGVNV-------------IYCAPS----------DRLVY--------SPKTPID- 521
Fly 522 ------------DLRSFGFRSYLVDLVTGPIPLINKLCASYSIHNIPIGTEAVGNYTSSIPKAIR 574
Fly 575 VYFGGSKKFVVTASRYRSDTILTESSIRAKNQLITVDSQQL----AL-------------VMKQC 622
Fly 623 SEAVKE--------SDSIKNAITQTDNEFERLQAVAKDEQEKRRKL----DQKIAHFNSLKTE-- 673
Fly 674 ------------IETLQKKLEALRNS-DSLDC-LETNFCNSLHKDLKKIFDADAELCSCLKAIDR 724
Fly 725 LIIEKNMAQ----TKVSIYMLQH--------ETQIEALKESE---------EQSKAATRDFQQLL 768
Fly 769 QCLENQISDVNKRKSAIQGLCHGEIPTSSK--FPFKKEFRELENIDLPELREAIHDFQARL---- 827
Fly 828 -ECMK------SVNSEAISSYQGLQNEVKQL------------------EEGIQESVN------- 860
Fly 861 ---QAKSIESGMSNLYD--------KWEPKLNSLVETISTKFSEFMESIEYVGE--VVLSKTDKY 912
Fly 913 ----------------------------DFDSYGIQIMVQFRRG--LQLQPLDKFIQSGGERAVS 947
Fly 948 IAIYSLSLQHVTHVPFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVT--PKLL 1005 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC5 | NP_996141.2 | ABC_SMC5_euk | 14..>160 | CDD:213244 | 40/156 (26%) |
Smc | 22..1011 | CDD:224117 | 256/1289 (20%) | ||
GrpE | 212..>316 | CDD:295646 | 34/141 (24%) | ||
ABC_SMC5_euk | <919..1025 | CDD:213244 | 24/91 (26%) | ||
Smc3 | NP_031816.2 | Smc | 1..1194 | CDD:224117 | 258/1295 (20%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 242..269 | 7/29 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1059..1090 | 2/30 (7%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |