DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vito and nol12

DIOPT Version :10

Sequence 1:NP_729096.1 Gene:vito / 326214 FlyBaseID:FBgn0052418 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001008168.1 Gene:nol12 / 493530 XenbaseID:XB-GENE-1011565 Length:216 Species:Xenopus tropicalis


Alignment Length:255 Identity:76/255 - (29%)
Similarity:115/255 - (45%) Gaps:50/255 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTRKKAPKKKT---EVVFDNKKRIEFLSGFRKRKNERRSRAKADLERNLKNERKRIRQE-VKDGF 61
            |.:||..|..|   |:.||.:||.|:|:||.|||.:||..|..:::|.:|.|:|::|:| .|:..
 Frog     1 MGKKKQKKGSTSCRELTFDEEKRREYLTGFHKRKMQRRKAAVEEIKRKIKEEQKKMREERHKEYM 65

  Fly    62 NHLKKSFEPLRELTEEDKAEEAEQQQEETYEDDEVQVKIVELTTNDLAAKRNMLGANTAEESEPE 126
            ..||:..|.|.||.|.|:.|.....:.|:.:.|.....:...|.:||    ::.|....    |.
 Frog    66 KMLKEREEALCELEETDELEGLVTSKCESVQYDHPNHTVTVTTISDL----DLSGIGLL----PL 122

  Fly   127 EQADQSEEDEADQANRIPGMDFDPNARKRKPKPEDEEEPKATKSNNSTLPDIKSKKDLDRLMK-- 189
            .:|.|.||:|.:                   |..|||:||::.|    ||    ||..|..:.  
 Frog   123 GKAQQEEEEENE-------------------KDADEEQPKSSVS----LP----KKAGDPFLSKK 160

  Fly   190 ----TKTLKKMHQSKLFKQKERLDKKNNQKKAKRDRNNTIKSVPKHQRKQLKYGKANQTK 245
                |.:|....|.|..|:..|.:.|..|...|:....|.|:   .:|||.  ||..:.:
 Frog   161 ICSLTASLHARSQRKAGKRPSRTNDKKKQTSGKQVSGRTSKA---QRRKQT--GKIGRNR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vitoNP_729096.1 Nop25 2..149 CDD:430839 47/150 (31%)
nol12NP_001008168.1 Nop25 5..>85 CDD:430839 33/79 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..154 17/64 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..216 15/54 (28%)

Return to query results.
Submit another query.