DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9903 and slc10a4

DIOPT Version :10

Sequence 1:NP_573132.1 Gene:CG9903 / 32621 FlyBaseID:FBgn0030756 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001315270.1 Gene:slc10a4 / 556491 ZFINID:ZDB-GENE-041014-249 Length:330 Species:Danio rerio


Alignment Length:309 Identity:73/309 - (23%)
Similarity:137/309 - (44%) Gaps:43/309 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 LNLGTVLDMQRLAGIICRPVGPVVGVVSRFVLMPAVGFGLGRALWPDSWPLQLALFYTALSPSGG 227
            |.||..:::.:|...|.:|:|.::..|.:|||||.:.|.|..|...:. ...:|:......|.|.
Zfish     2 LGLGCTVELSQLGEHIRKPIGVLLAAVCQFVLMPLIAFLLALAFSLND-VAAMAVLLCGCCPGGN 65

  Fly   228 LANVCAVFLKGNINLSVATTTINSLLALALLPIWILVLGRILYEDDEL-TVPFGQLSGGAAALVA 291
            |:|:..:.:.|::|||:..|..::||||.|:|:.:.:..|.......: .:|||.:.....:.:.
Zfish    66 LSNIMTLLVNGDMNLSIIMTISSTLLALVLMPLCLWMYSRAWINTPVVDLLPFGPIILTLCSTLI 130

  Fly   292 CLAIGVLLRLCLPRTTRFIFRFLKPLSVVLSLCLVGLTVGLNSFVFYEFTWQIL----------- 345
            .:.:||.||.          |::....|::.:.|..|.|.|  .:.:..|..:|           
Zfish   131 PIGLGVWLRQ----------RYIHVAEVIIKVSLWSLLVTL--LMLFIMTGTMLGPELLATIPAS 183

  Fly   346 --VAAVCLPLAGYLSTYLLSKILCRSSTDALTLAIEASVLNMTMPIVLLQSSQLQQPQL-DLVLV 407
              :.||.:|:|||.:.|.|:.:.........|:::|....|:.:...:|:.:  ..||| ..:.:
Zfish   184 VYLVAVLMPMAGYTAGYGLATLFDLPPNSRRTVSLETGCQNIQLCTAILKLA--FPPQLMGGMYM 246

  Fly   408 VPIASSLISLV---LVVLFYGIRRCLGCNRQQDADAFDHKKLLAEQEGD 453
            .|:..:|....   :.:|.|.:.|          ....||:.|.|.:.|
Zfish   247 FPLLYALFQAAEAGIFILVYRMYR----------KEVLHKQDLMEDDDD 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9903NP_573132.1 YfeH 135..390 CDD:440154 59/240 (25%)
slc10a4NP_001315270.1 SBF 1..271 CDD:450274 68/293 (23%)

Return to query results.
Submit another query.