DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and AT3G18600

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_188490.1 Gene:AT3G18600 / 821391 AraportID:AT3G18600 Length:568 Species:Arabidopsis thaliana


Alignment Length:475 Identity:138/475 - (29%)
Similarity:234/475 - (49%) Gaps:33/475 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKL--QR 103
            |.|:.|..:....|.:.|::..|.||..:|..:|||:||:..|:||||||..||||..|.|  :|
plant    91 FDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKER 155

  Fly   104 REPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPG 168
            ..|..|...:::.||||||:||....:||.:.......:|:||::..|:...|.:..::::||||
plant   156 FSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGSNLVIATPG 220

  Fly   169 RFL-HLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFA 232
            |.| ||..........::.:|.|||||:.|..|.|.:|:.|..||.:|||.:||||....:.:.|
plant   221 RLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQTSKVKDLA 285

  Fly   233 RAGLNDPVLIRLDVESKLPDALALKFLYCRPDDRYTALVVLLKYVIP-VQSQTVVFAGTQHHVEL 296
            |..|..||.:.:|...:......|:..||....: ..|::|:.::.. :..:.:||..|...|:.
plant   286 RVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSK-QRLILLISFLKKNLNKKIMVFFSTCKSVQF 349

  Fly   297 ISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGK 361
            .:.|:..:.:..:.::..:|...|......|:..|..:|:.|||||||:||||:|:::....|.|
plant   350 HTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDK 414

  Fly   362 PKLFVHRVGRCARA-GRTGTAYSIVSTDDTAHLLDLHLFLNRPFNIHDSSALGTIPQDLLEEEHL 425
            |..::|||||.||. |..|.|..::..::...:..|              ....:|...||....
plant   415 PTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYL--------------KAAKVPVKELEFNEK 465

  Fly   426 TVTDIK--------KSHHIAGVLRTSENAYKKYLSSRPVASTDANARVKKIKFFALKPLEDFFTA 482
            .:::::        |.:::.   :.:::||:.|||:....|......|.::...|:  .|.|..:
plant   466 RLSNVQSALEKCVAKDYNLN---KLAKDAYRAYLSAYNSHSLKDIFNVHRLDLLAV--AESFCFS 525

  Fly   483 APVLAQAAEASGQSTESQAK 502
            :|........||.....:|:
plant   526 SPPKVNLNIESGAGKVRKAR 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 78/204 (38%)
SrmB 41..449 CDD:440279 126/420 (30%)
DBP10CT <679..721 CDD:462373
AT3G18600NP_188490.1 SrmB 90..461 CDD:440279 121/384 (32%)
DUF4217 471..529 CDD:464056 12/62 (19%)
Blue background indicates that the domain is not in the aligned region.

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