DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and ddx54

DIOPT Version :9

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:XP_002934380.1 Gene:ddx54 / 733994 XenbaseID:XB-GENE-1011576 Length:847 Species:Xenopus tropicalis


Alignment Length:857 Identity:366/857 - (42%)
Similarity:520/857 - (60%) Gaps:75/857 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RKKQADEIPGFPSLDNDAGTSDRGAD----ILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVP 62
            :|:...::|.||:.|   .|||...|    :.....||.||||||||||.:.:.||:.|:|||||
 Frog    35 QKEDGVKLPAFPTAD---ATSDTELDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVP 96

  Fly    63 TPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYK 127
            ||||||.||:||:|:||||||:||||||||||||:||||:......|.|.||||||||||:||.|
 Frog    97 TPIQRKVIPVILDGKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLK 161

  Fly   128 FIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLKLNSIEYVVFDEA 192
            |.||||:|..||:.|:||||.|:.||:|:|..||:|:|||||.:|:.:||:|||.::||||||||
 Frog   162 FTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRTVEYVVFDEA 226

  Fly   193 DRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALK 257
            ||||||||.|||.|.:.|||.:|||::|||||||:|:|||||||.:||||||||::||.|.|.|.
 Frog   227 DRLFEMGFAEQLQEIISRLPETRQTLLFSATLPKMLLEFARAGLTEPVLIRLDVDTKLSDQLKLS 291

  Fly   258 FLYCRPDDRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKI 322
            |...|.:|:...|:.||:.|:..|.|||:|..|:||.|.:..:|...||..:.:||:||..||||
 Frog   292 FFNVRVEDKPAVLLHLLRCVVKPQEQTVIFVATKHHAEYLRELLDMQGIPCSHIYSALDQTARKI 356

  Fly   323 NTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVST 387
            |...|::.||..|:||||||||||||.||.|:|.:||.|.|||:|||||.|||||:|||||:::.
 Frog   357 NLGLFLHGKVRALLVTDVAARGIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSLIAP 421

  Fly   388 DDTAHLLDLHLFLNRPFNI----------HDSSALGTIPQDLLEEEH-LTVTDIKKSHHIAGVLR 441
            |:..::.||||||.||..:          .....||.:||.|:::|. |.:||.::|..:..:..
 Frog   422 DEIPYVYDLHLFLGRPLKLATAQMMETGADTDGVLGRVPQSLIDDEDALLITDRERSLELQNLHN 486

  Fly   442 TSENAYKKYLSSRPVASTDANARVKKIKF--FALKPLEDFFTAAPVLAQAAEASGQSTESQAKVS 504
            .:|||||:|:.|||..|.::..|||...:  ..:.||  |::                      .
 Frog   487 VAENAYKQYIKSRPTPSPESIKRVKDANYNLLGVHPL--FWS----------------------Q 527

  Fly   505 AAERKLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVMKEKRMQHAEVINKFRQQRAEEDID 569
            ..|.::|..|  .:..::|::...|:||:|.|.|:....||:.||....:||.||  ||.:|   
 Frog   528 LGEEEMQRLK--FVDGIKSYKSKATIFEINATNKTNASEVMRAKRSHDGKVIAKF--QRLQE--- 585

  Fly   570 EEKKTIEALNPSSGRM---PTADEEAISSTFNKVVAPKRLQNMDALYKDKPKKKKRKINSKDEDH 631
            |:..|::.|......:   ..:|||.:...|::|:..:::.:.|   :.:..||::...|.|.|:
 Frog   586 EKSATVQTLTSGISSLSCKQESDEENMEGVFSQVLGKRKITDKD---EAEGNKKRKAGTSHDTDY 647

  Fly   632 YVPYQSADKHTEDGLAI--NNFERQAQNAEFSVSDRDLSQEVKHKPGLKKWDRIKKKMVSVQDPR 694
            |:||:..|..:|.||:|  ::||:.|..|...:.. |.:::::....:.||||.|||.|....|.
 Frog   648 YIPYRPKDFESERGLSIGASSFEQAAAGAVLDLLG-DQTEDLRKNKQVMKWDRKKKKFVGTGGPE 711

  Fly   695 -ANKIRTESGAWIPASFKTGRYAEWKEKSKIEDQLQRENAGSDDENA---KPLSHAQRYPVSRHA 755
             ..||:||||..|.:|:|...|..||:|.||:||...|.....|:.|   :......|.| .|.:
 Frog   712 DKKKIKTESGRLISSSYKKNLYEGWKKKYKIDDQDSEEEDEERDQRAAAGRRKGRGGRGP-QRSS 775

  Fly   756 RHNLKLELKKRLTGNDKEMRRPEQIVKSR---MRLEFIKKRNEENAERKSENRKRSMRKTQ--RP 815
            ..:|..:.|.:     .|:|..:||:|:|   .:..|::|...:..:.|:.:....|:|:.  |.
 Frog   776 HSSLGPQGKAK-----SELRSKQQILKTRKAQAKQNFLQKGGLKKMKNKTRHLANHMKKSAFGRG 835

  Fly   816 KAQSTGGSKRRK 827
            |:|.....|.||
 Frog   836 KSQGFKKGKSRK 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc 41..243 CDD:238167 138/201 (69%)
DEXDc 54..243 CDD:214692 130/188 (69%)
HELICc 263..384 CDD:238034 66/120 (55%)
DBP10CT 666..721 CDD:285373 22/55 (40%)
ddx54XP_002934380.1 SrmB 51..477 CDD:223587 245/425 (58%)
DEADc_DDX54 73..277 CDD:350717 140/203 (69%)
DBP10CT 679..739 CDD:369712 22/60 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 239 1.000 Domainoid score I2243
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5590
Inparanoid 1 1.050 625 1.000 Inparanoid score I851
OMA 1 1.010 - - QHG52023
OrthoDB 1 1.010 - - D255924at33208
OrthoFinder 1 1.000 - - FOG0004971
OrthoInspector 1 1.000 - - oto104586
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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