DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32344 and pit

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:595 Identity:156/595 - (26%)
Similarity:268/595 - (45%) Gaps:108/595 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILE 75
            |.|:.|::..|.:.....|..:...::|.......:....::.|.:.|:...|.||.|::..:|:
  Fly   159 GKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLK 223

  Fly    76 GRDVVAMAKTGSGKTACFLIPLFEKLQ--RREPTKGARALILSPTRELAVQTYKFIKELGRFMEL 138
            |||:|..|:||||||..||||..|.:.  |..|..|...:|:||||||::||:..:|||......
  Fly   224 GRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHH 288

  Fly   139 KSILVLGGDSMDSQFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIEYVVFDEADRLFEMGFGE 202
            ...||:||.:...:...:....:::||||||.| ||....|....:::.::.||.||:.|:||.|
  Fly   289 TYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEE 353

  Fly   203 QLNETLHRLPSSRQTVMFSATLPKLLVEFARAGL-NDPVLIRL--DVESKLPDALALKFLYCRPD 264
            :|.:.::.||..|||::||||....:...::..| ::|:.:.:  :.::...|.|...::.|..:
  Fly   354 ELKQIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSE 418

  Fly   265 DRYTALVVLLKYVIPVQSQTVVF----AGTQHHVELISYILTEAGISNASVYSSLDPAARKINTA 325
            .|...|...||.  ..:.:.:||    ...::|.||.:||    .:...|::.......|.....
  Fly   419 KRLLVLFTFLKK--NRKKKVMVFFSSCMSVKYHHELFNYI----DLPVTSIHGKQKQTKRTTTFF 477

  Fly   326 KFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCAR-AGRTGTAYSIVSTDD 389
            :|.|.:..:|:.|||||||:|||.:|::|....|..|:.::|||||.|| :|.:|.|..::..::
  Fly   478 QFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEE 542

  Fly   390 TAHLLDLHLFLNRPFNIHDSSALGTIPQDLLEEEHLTVTDIK--------KSHHIAGVLRTSENA 446
            ...|..|              ....:|.:..|.....:.||:        |::.:.   ::::.|
  Fly   543 LGFLRYL--------------KAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLN---QSAKEA 590

  Fly   447 YKKYLSSRP---------VASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAK 502
            :|.|:.:..         |.:.|..|..|...|. :.|:.|.                      |
  Fly   591 FKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFL-VPPVVDL----------------------K 632

  Fly   503 VSAAERKLQEEKHDILVKMRSFRPGGTVF----ELNTTQKSTQFIVMKEKRMQHAEVINKFRQQR 563
            |.||:|:..|:           |.||..|    ::|....|.|         :|.:.:|:     
  Fly   633 VGAAKRERPEK-----------RVGGGGFGFYKKMNEGSASKQ---------RHFKQVNR----- 672

  Fly   564 AEEDIDEEKK 573
                 |:.||
  Fly   673 -----DQAKK 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 72/207 (35%)
SrmB 41..449 CDD:440279 123/426 (29%)
DBP10CT <679..721 CDD:462373
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 72/196 (37%)
SF2_C_DEAD 408..537 CDD:350174 42/134 (31%)
DUF4217 570..627 CDD:464056 9/60 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.