DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and CG7878

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:373 Identity:118/373 - (31%)
Similarity:204/373 - (54%) Gaps:17/373 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIP--LFEKLQR--REPTKG 109
            ::::.|||.|:..|:|||.:..|::|:|.|::.:|:||:|||..||:|  :..:.|.  |....|
  Fly   293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGG 357

  Fly   110 ARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLC 174
            |..|:|:||||||:|....:|:.. |..:|::.|.||.:.:.|.|.:....::|:.||||...|.
  Fly   358 ANVLVLAPTRELALQIEMEVKKYS-FRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLI 421

  Fly   175 VEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDP 239
            :...:.:::|.|:|.|||||:.:|||..|:.:.:..:...|||:|.|||.|..:...|::.:.:|
  Fly   422 MANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNP 486

  Fly   240 VLI---RLDVESKLPDALALKFLYCRPD-DRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYI 300
            :.:   .||:.:.......:|.:  ..| |::..:...:|.:... .:.::|.|.:...:.:|..
  Fly   487 IQVCVGSLDLAATHSVKQIIKLM--EDDMDKFNTITSFVKNMSST-DKIIIFCGRKVRADDLSSE 548

  Fly   301 LTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLF 365
            ||..|.....::.:.|...|:...|...:..|.:|:.||||:||:||..:..|:|..||...:.:
  Fly   549 LTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEY 613

  Fly   366 VHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR-----PFNIHD 408
            ||||||..||||.||:.|..:.:|.|...:|...|..     |..:|:
  Fly   614 VHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHN 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 70/200 (35%)
SrmB 41..449 CDD:440279 118/373 (32%)
DBP10CT <679..721 CDD:462373
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 118/373 (32%)
Blue background indicates that the domain is not in the aligned region.

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