DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and Rm62

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:375 Identity:105/375 - (28%)
Similarity:190/375 - (50%) Gaps:10/375 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRRE 105
            |..:.|...::|.|.::|||.||.||.:..|:.:.|.:.|.:||||||||..:::|....:..::
  Fly   283 FSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQ 347

  Fly   106 PTK---GARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATP 167
            |.:   |..||:|:||||||.|..:...|.|....:::..|.||.....|...:....::::|||
  Fly   348 PLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATP 412

  Fly   168 GRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFA 232
            ||.:.........|....|:|.|||||:.:|||..|:.:.:.::...|||:|:|||.||.:.:.|
  Fly   413 GRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLA 477

  Fly   233 RAGLNDPVLIRL-DVESKLPDALALKFLYCRPDDRYTALVVLLKYVIPVQ---SQTVVFAGTQHH 293
            ...|.:.:.|.: .:|......:......|....:...|..||..:....   .:.::|..|:..
  Fly   478 EDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRR 542

  Fly   294 VELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHF 358
            |:.:...:...|:...:::.....:.|.....:|.:.|.::|:.|||||||:|:..:.:|:|..:
  Fly   543 VDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDY 607

  Fly   359 PGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAH---LLDLHLFLNRPFN 405
            |...:.::||:||..|:...||:::..:.::...   |:|:....|:..|
  Fly   608 PQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEIN 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 69/204 (34%)
SrmB 41..449 CDD:440279 105/375 (28%)
DBP10CT <679..721 CDD:462373
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 105/375 (28%)
Blue background indicates that the domain is not in the aligned region.

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