DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and abs

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster


Alignment Length:408 Identity:126/408 - (30%)
Similarity:207/408 - (50%) Gaps:23/408 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIP--LFEKLQR 103
            |:.|.....::.|:..:|.|.|||||.:.:|.:|.|||::.:|.||||||..|::|  :|...|.
  Fly   179 FREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQE 243

  Fly   104 R----EPTKGARALILSPTRELAVQTYKFIKELGRFM------ELKSILVLGGDSMDSQFSAIHT 158
            .    |..:|...||:.|:||||.||::.|:...:.:      |::|.|.:||..:......|..
  Fly   244 YSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISR 308

  Fly   159 CPDVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSAT 223
            ...::||||||.:.:..:..|.|:...|:..|||||:.:|||.|.:..........|||::||||
  Fly   309 GVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSAT 373

  Fly   224 LPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPDDRYTALVVLLKYVIPVQSQTVVFA 288
            :||.:..|||:.|..||.|.:.........:..:..|.:.:.:...|:..|:...|   ..::||
  Fly   374 MPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAP---PVLIFA 435

  Fly   289 GTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFV 353
            ..:..|:.|...|...|:...:::...|...|......:...|..||:.||||::|:|.|::..|
  Fly   436 EKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHV 500

  Fly   354 VNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVS-TDDTAHLLDL-HLFLNRPFNIHDSSALGTIP 416
            :|...|...:.:|||:||..|:...|.|.:::: |.:.:.|||| ||.:.....:.|  .|..:.
  Fly   501 INYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPD--FLDELA 563

  Fly   417 QDLLEEEHLTVTDIKKSH 434
            .: .|.:||   |:..||
  Fly   564 PE-TEHQHL---DLGDSH 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 77/213 (36%)
SrmB 41..449 CDD:440279 126/408 (31%)
DBP10CT <679..721 CDD:462373
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 75/204 (37%)
SF2_C_DEAD 404..532 CDD:350174 33/130 (25%)
Blue background indicates that the domain is not in the aligned region.

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