DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and Ddx1

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:451 Identity:116/451 - (25%)
Similarity:186/451 - (41%) Gaps:95/451 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NDAGTSDRGADILKS-KSKKNKSGGF----QSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEG 76
            :|.|.:...||::.. ...||:...|    |::|:.|.|...:.|..: .|..:.:.        
  Fly   179 DDYGEAFGKADVIGCLLDLKNQEVSFTKNGQNLGVAFRLPDNLAKETF-YPAVVLKN-------- 234

  Fly    77 RDVVAMAKTGSGKT------------ACFLIPLFEKLQR-REPTKGA----------RALILSPT 118
                |..:...|||            ||...|...|... ..|..||          :|:|:.|:
  Fly   235 ----AEMQFNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEPS 295

  Fly   119 RELAVQTYKFIKELGRFM---ELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDLK 180
            ||||.|||..|::....:   |::|:|::||..::.|.:.:.....::|.||||...:.....:.
  Fly   296 RELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGLVL 360

  Fly   181 LNSIEYVVFDEADRLFEMGFGEQLNETLHRLPS------SRQTVMFSATLPKLLV-EFARAGLND 238
            |....:.|.||||.|.:.|:.|.::....::|.      ..|.|:.||||....| :.|...::.
  Fly   361 LTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHF 425

  Fly   239 PVLIRLDVESKLPDALALKFLYCRPD--------------------DR------------YTALV 271
            |..:.|..|..:|:  .:..:.|..|                    ||            .:..|
  Fly   426 PTWVDLKGEDAVPE--TVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAV 488

  Fly   272 VLLK--YVIPV-----QSQTVVFAGTQHHVELISYILTEAG---ISNASVYSSLDPAARKINTAK 326
            .|||  |.:..     ..:.::|..|:...:.:...|.:.|   .|...::....|..||.|...
  Fly   489 KLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRKPQERKENLEM 553

  Fly   327 FVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVST 387
            |..::|..||.|||||||:||..|.|::|:..|.....:|||:||..||.|.|.|.|:|:|
  Fly   554 FKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLVAT 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 59/240 (25%)
SrmB 41..449 CDD:440279 110/426 (26%)
DBP10CT <679..721 CDD:462373
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933 14/75 (19%)
SrmB 283..613 CDD:440279 90/331 (27%)
Blue background indicates that the domain is not in the aligned region.

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