DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32344 and ais

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_649009.1 Gene:ais / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster


Alignment Length:668 Identity:168/668 - (25%)
Similarity:278/668 - (41%) Gaps:171/668 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQADEIPGFPSLDNDAGT-------------SDRGADILKSKSKKN---KSGGFQSMGLG----- 47
            |..::|..|..||.|:..             |.:..:|.|:..:.|   |..|.:.:|..     
  Fly    50 KDDEDITEFRLLDGDSSNQPKRKKPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPV 114

  Fly    48 ---------FELI----KGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFE 99
                     |:::    :.:..|.:..|||||.:.:|::|:.|.::|.|.||||||..||.|:..
  Fly   115 DSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIIN 179

  Fly   100 KLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIH--TCP-- 160
            .| |...|.|.|||:|:||||||.|.|:...||.|...|::..:    |..|:....|  .|.  
  Fly   180 GL-RAHKTTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFI----SKVSEAKQKHGAECKQR 239

  Fly   161 -DVIVATPGRFLHLCVEMD--LKLNSIEYVVFDEADRLFEMG---FGEQLNETLHRLPSSRQTV- 218
             |::|:||.|...|..:..  |.|:.:|:.|.||||||.|.|   |.|||::......:..:.| 
  Fly   240 YDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVA 304

  Fly   219 MFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPD-DRYTALVVLLKYVIPVQS 282
            .||||....:.::|...|.:.|.|.:.|::...:.:..:.|:...: .:..|:..|::.  .:|.
  Fly   305 FFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQ--GLQP 367

  Fly   283 QTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDI 347
            ..:||..::...:.:...|...||:...:::......|......|....:.|||.|::..||||.
  Fly   368 PVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDF 432

  Fly   348 PSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNRPFNIHDSSAL 412
            ..::.|:|..||.....::||:||..||||.|.|.:..:.:||::|..:.|.:        .::.
  Fly   433 KGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALII--------KNSG 489

  Fly   413 GTIPQDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVASTDANARVKKIKFFALKPLE 477
            ||:|:.:|:        :||                       |..::|..|.|       ||| 
  Fly   490 GTVPEYMLQ--------MKK-----------------------VRKSEAKMRAK-------KPL- 515

  Fly   478 DFFTAAPVLAQAAEASGQSTESQAKVSAAERKLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQF 542
                                               ::.||..|:|....|      :...|||  
  Fly   516 -----------------------------------DREDISTKIRPETKG------DEKHKST-- 537

  Fly   543 IVMKEKRMQHAEVINKFRQQRAEEDIDEEKKTIEALNPSSGRMPTADEEAISSTFNKVVAPKRLQ 607
               |.|:::..|.|.|.| :..|:|::.::|.:       |.:.|..:.          |.||..
  Fly   538 ---KLKKVERTEKILKNR-KGYEKDLNSKQKKL-------GNIKTELKP----------AGKRKG 581

  Fly   608 NMDALYKDKPKKKKRKIN 625
            |::       ||.|.|.|
  Fly   582 NVE-------KKTKNKNN 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 77/232 (33%)
SrmB 41..449 CDD:440279 121/437 (28%)
DBP10CT <679..721 CDD:462373
aisNP_649009.1 SrmB 123..538 CDD:440279 135/514 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.