DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and CG6418

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:660 Identity:183/660 - (27%)
Similarity:281/660 - (42%) Gaps:118/660 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RKKQADEIPG---------------FPSLDNDAGTSDRGADILKSKSKKNKSG--------GFQS 43
            :||..|.:|.               :...|:.|...|.....|:.......:|        .|..
  Fly   209 KKKDIDPLPPIYHSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGH 273

  Fly    44 MGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKL---QRRE 105
            .|...:|||.:.|..|..|||||.:.:|..|.|||::.:|||||||||.|:.|:...:   ::.:
  Fly   274 FGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLK 338

  Fly   106 PTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRF 170
            |..|...|||:|||||::|.|...|:.|:...|..:...||.|...|..|:....::|||||||.
  Fly   339 PGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRM 403

  Fly   171 LHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAG 235
            :.:.......|..:.::|.|||||:|.|||..|:....:.:...||.:|||||..|.:...||..
  Fly   404 IDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDV 468

  Fly   236 LNDPV-LIRLDVESKLPDALALKFLYCRPDDRYTALVV-LLKYVIPVQSQTVVFAGTQHHVELIS 298
            |:||| :::.|:.....|.....:::..|..::..|:. |:|::  .:...::|...:...|.:|
  Fly   469 LSDPVRIVQGDLNEANQDITQSVYVFPNPLQKWNWLLCHLVKFL--SEGSVLIFVTKKVDAETVS 531

  Fly   299 YILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPK 363
            ..|.....:...::..:|.|.|.....:|..|:..:|:.|||||||:|||.:..|||.......:
  Fly   532 NNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIE 596

  Fly   364 LFVHRVGRCARAGRTGTAYSIVSTDD---TAHLLDLHLFLNRPFNIHDSSALGTIPQDLLEEEHL 425
            ...||:||..|||..|.||::|:..|   ..||:.         |:..:..|  :|.||:|    
  Fly   597 THTHRIGRTGRAGEKGNAYTLVTDKDKEFAGHLVR---------NLEGADQL--VPDDLME---- 646

  Fly   426 TVTDIKKSHHIAGVLRTSENAYKKYLSSRPV-ASTDANARVKKIKFFALKPLEDFFTAAPVLAQA 489
              ..:|.|.     .|:|.  :|:....||. ..|....|.|.                  ....
  Fly   647 --LAMKSSW-----FRSSR--FKQGKGKRPTNTHTGLGYREKG------------------NGGG 684

  Fly   490 AEASGQSTESQAKVSAAERKLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVMKEK-RMQHA 553
            ...|...:||.|.|||         |.     .|..|....|. ::...:.::..|:|. |.|:.
  Fly   685 GYGSAGGSESTASVSA---------HS-----PSDGPSSKAFS-SSGPATDRYTAMREAFRSQYN 734

  Fly   554 EVINKFRQQRAEEDIDEEKKTIEALNPSSG------RMPTADEEAISSTFNKVVAPKRLQNMDAL 612
               |:|   ||..|     :|.|...|.||      ..|::..:..|::     :.....|.|| 
  Fly   735 ---NQF---RASSD-----RTWEKTLPESGVFAAPMAPPSSSTQGASAS-----SANNSSNQDA- 782

  Fly   613 YKDKPKKKKR 622
               |..||.|
  Fly   783 ---KRAKKSR 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 82/215 (38%)
SrmB 41..449 CDD:440279 134/415 (32%)
DBP10CT <679..721 CDD:462373
CG6418NP_648413.1 SrmB 269..634 CDD:440279 125/375 (33%)
Blue background indicates that the domain is not in the aligned region.

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