DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and ddx49

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_938179.1 Gene:ddx49 / 386632 ZFINID:ZDB-GENE-031030-3 Length:468 Species:Danio rerio


Alignment Length:509 Identity:157/509 - (30%)
Similarity:243/509 - (47%) Gaps:102/509 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRRE 105
            |:|:||...||:...:.|...||.:|.|.||.||:|||.:..|||||||||.|::|:.:||.  |
Zfish     4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQKLS--E 66

  Fly   106 PTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRF 170
            ...|...|:|:||||||.|..:..:.||:.:.||..:::||..|.:|...:...|.|:||||||.
Zfish    67 DPYGVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRL 131

  Fly   171 L-HLCVEMDLKLNSIEYVVFDEADRLFEMG---FGEQLNETLHRLPSSRQTVMFSATLPKLLVEF 231
            . |:.....:.||.|::::.||||||.|.|   |.:.|...|..:|:.|||::|||||...|.:.
Zfish   132 ADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAKRQTLLFSATLTDTLQQL 196

  Fly   232 ARAGLNDPVLIRLDVESKLPDALALKFLYCRPDDRYTALVVLLKYVIPVQS--------QTVVFA 288
            ....:|.|.......:.:..:.|..:|: ..|:....|.:|.|     :|:        ..::|.
Zfish   197 QSIAMNRPFFWEHKSDVQTVEELDQRFI-LTPEKVKDAYLVHL-----IQTFQDEHDDWSIIIFT 255

  Fly   289 GTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFV 353
            .|....::::.:|.|......|::|.:....|..|.|||.:....:||.|||||||:|||::..|
Zfish   256 NTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVV 320

  Fly   354 VNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNRPFNIHDSSALGTIPQD 418
            :|.:.||.||:::|||||.|||||.|.:.::|:.      .|:||.                  :
Zfish   321 INHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQ------YDIHLI------------------N 361

  Fly   419 LLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVASTDANARVKKIKFFALKPLED----- 478
            .:||::.|                                        |:|.|   |:|:     
Zfish   362 AIEEQNQT----------------------------------------KLKEF---PIEEKEVLK 383

  Fly   479 FFTAAPVLAQAAEASGQSTESQAKVSAAERK----------LQEEKHDILVKMR 522
            ..|...|..:..|...:||:...|....:||          |:|::.:.|.|:|
Zfish   384 ILTQVNVTRRQCEIKLESTDFDEKKKINKRKQMILDGKDPDLEEKRKNELEKIR 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 85/205 (41%)
SrmB 41..449 CDD:440279 139/419 (33%)
DBP10CT <679..721 CDD:462373
ddx49NP_938179.1 SrmB 1..383 CDD:440279 144/453 (32%)
Blue background indicates that the domain is not in the aligned region.

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