DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and Ddx27

DIOPT Version :9

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001129273.1 Gene:Ddx27 / 362274 RGDID:1305634 Length:761 Species:Rattus norvegicus


Alignment Length:684 Identity:190/684 - (27%)
Similarity:314/684 - (45%) Gaps:96/684 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQADEIPGFPSL-DNDAGTSDR---------------GADILKSKSKKNK-----SGG------- 40
            ::..::.|..:| :|:||:.|.               .||.||.|.||.|     |||       
  Rat   115 QEGSDLKGQENLGENEAGSKDEESETDYSSEDEEILTKADTLKVKEKKKKKKGQESGGFFEDASE 179

  Fly    41 ------FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFE 99
                  ||.|.|...|:|.||..|:|.|||||:..||:.|.|:|:.|.|.||:||||.|.:|:.|
  Rat   180 YDKSLTFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 244

  Fly   100 KLQRREPTKGA--RALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDV 162
            :|..: |.:.|  |.|:|.|||||.:|.:...|:|.:|..:.:.|.:||..:.||.:|:...||:
  Rat   245 RLIYK-PRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDI 308

  Fly   163 IVATPGRF---LHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATL 224
            ::|||||.   ||.|  ....|:|||.::.|||||:.:..|.||:.|.:......|||::||||:
  Rat   309 LIATPGRLIDHLHNC--PSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATM 371

  Fly   225 PKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPD---DRYTALVVLLKYVIPVQSQTVV 286
            ...:.:.|...|.:||.|.::..:.:...|..:|:..||:   ||...:..||....  ....::
  Rat   372 TDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTF--TDHVML 434

  Fly   287 FAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLD 351
            |..|:.....:..:|...|:....::.:|....|.....:|.::::.:|:.|||||||:||..:.
  Rat   435 FTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVK 499

  Fly   352 FVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNRPFNIHDSSALGTIP 416
            .|:|...|...|.:||||||.|||||.|.:.|:|..::...|.::......|....      .:|
  Rat   500 TVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPVKAR------ILP 558

  Fly   417 QDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVASTDANARVKKIKFFALKPLEDFFT 481
            ||::.:....:..::|..:....|...|         |.|..::|                ...|
  Rat   559 QDVILKFRDKIEKMEKDVYAVLQLEAEE---------REVQQSEA----------------QIDT 598

  Fly   482 AAPVLAQAAEASGQSTESQAKVSAAERKLQE-----EKHDILVK--------MRSFRPGGTVFEL 533
            |..:|::..:.:.|..|.....:..|||.::     ::.|:.::        |:..:..|.:   
  Rat   599 AQRLLSKGKQTADQEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDVKKKGEM--- 660

  Fly   534 NTTQKSTQFIVMKEKRMQHAEVINKFRQQRAEEDIDEEKKTIEALNPSSGRMPTADEEAISSTFN 598
             |.::.:||.::|.:...........|.:||....:||.....|......:....||| :::|..
  Rat   661 -TAEERSQFEILKAQMFAERLAKRNRRTKRARAMPEEEPAAGPAKKQKQHKKSVFDEE-LTNTSK 723

  Fly   599 KVVAPKRLQNMDALYKDKPKKKKRKINSKDEDHY 632
            |.:...|........|.....::|:.|.|.:..|
  Rat   724 KALKQYRAGPSFEERKQLGLPRQRRGNFKSKSRY 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc 41..243 CDD:238167 86/206 (42%)
DEXDc 54..243 CDD:214692 80/193 (41%)
HELICc 263..384 CDD:238034 38/123 (31%)
DBP10CT 666..721 CDD:285373
Ddx27NP_001129273.1 SrmB 175..640 CDD:223587 150/500 (30%)
DEADc 186..390 CDD:238167 86/206 (42%)
Helicase_C 415..524 CDD:278689 33/110 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268859at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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