DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32344 and Dbp80

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:349 Identity:99/349 - (28%)
Similarity:173/349 - (49%) Gaps:25/349 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEG--RDVVAMAKTGSGKTACFLIPLFEKLQ- 102
            |:::.|...|:|||...|:..|:.||...:|.:|..  ::::|.:::|:||||.|::.:..::. 
  Fly    75 FEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNV 139

  Fly   103 -RREPTKGARALILSPTRELAVQTYKFIKELGRF-MELKSILVLGGDSMD-SQFSAIHTCPDVIV 164
             ...|    :.|.||||.|||:||.:....:|:| .|:|....:.|:.:| |:....|    :::
  Fly   140 CLNHP----QVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEEH----ILI 196

  Fly   165 ATPGRFLHLCVEMDL-KLNSIEYVVFDEAD-RLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKL 227
            .|||:.|...::..| .:..|...|.|||| .:...|..:|.......|....|.:.||||..|.
  Fly   197 GTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKE 261

  Fly   228 LVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRPDD-RYTALVVLLKYVIPVQSQTVVFAGTQ 291
            :::|||..:.||.:|||..|.:..:.:...::.|:.:: :|.|:..:  |......|.::|..|:
  Fly   262 VMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNI--YGCISVGQAIIFCHTK 324

  Fly   292 HHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNL 356
            .....::..:|..|.|.|.:...|....|.....:|.:....|||.|::.:|||||..:..|||.
  Fly   325 RTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNF 389

  Fly   357 HFP------GKPKLFVHRVGRCAR 374
            ..|      ...:.::||:||..|
  Fly   390 DLPVDLDGMADCETYLHRIGRTGR 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 63/209 (30%)
SrmB 41..449 CDD:440279 99/349 (28%)
DBP10CT <679..721 CDD:462373
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 62/204 (30%)
SF2_C_DEAD 288..414 CDD:350174 32/128 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.