DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32344 and Ddx47

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001015005.2 Gene:Ddx47 / 297685 RGDID:1310437 Length:455 Species:Rattus norvegicus


Alignment Length:478 Identity:146/478 - (30%)
Similarity:246/478 - (51%) Gaps:41/478 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTI 70
            |||.|..|:            :.|::.:::.::..|:.:|:...|.:...:.|:..||.||.:.|
  Rat     3 ADEEPDSPT------------EALQTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAI 55

  Fly    71 PLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRF 135
            ||.|:|||::.:|:||||||..|.:|:...|  .|..:...||:|:||||||.|..:..:.||..
  Rat    56 PLALQGRDIIGLAETGSGKTGAFALPILNAL--LETPQRLFALVLTPTRELAFQISEQFEALGSS 118

  Fly   136 MELKSILVLGG-DSMDSQFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIEYVVFDEADRLFEM 198
            :.::..:::|| ||| ||..|:...|.:::|||||.: ||.......|.:::|:|.|||||:..|
  Rat   119 IGVQCAVIVGGIDSM-SQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNM 182

  Fly   199 GFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALKFLYCRP 263
            .|..::::.|..:|..|:|.:||||:.|.:.:..||.|.:||...:..:.:..:.|...:|:...
  Rat   183 DFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPS 247

  Fly   264 DDRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFV 328
            ..:.|.||.:|..:  ..:..::|..|.::.:..:.:|...|.:...::..:..:.|..:..||.
  Rat   248 KFKDTYLVYILNEL--AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310

  Fly   329 NKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHL 393
            .|..|:|:.||||:||:|||.:|.|||...|...|.::|||||.|||||:|.|.:.|:.      
  Rat   311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ------ 369

  Fly   394 LDLHLFLNRPFNIHDSSALGTIPQDLLEEEHLTVTD-IKKSHHIAGVLRTSENAYKKYLSSRP-- 455
            .|:.||......|  ...|...|..  :||.:.:|: :.::...|.:........||.....|  
  Rat   370 YDVELFQRIEHLI--GKKLPVFPTQ--DEEVMMLTERVSEAQRFARMELREHGEKKKRKREDPGD 430

  Fly   456 ---------VASTDANARVKKIK 469
                     |.:..|..::||.|
  Rat   431 DDDTEGAIGVRNKVAGGKMKKRK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 78/205 (38%)
SrmB 41..449 CDD:440279 132/410 (32%)
DBP10CT <679..721 CDD:462373
Ddx47NP_001015005.2 SrmB 23..453 CDD:440279 139/444 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.