DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and H20J04.4

DIOPT Version :10

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001040789.1 Gene:H20J04.4 / 186756 WormBaseID:WBGene00019219 Length:561 Species:Caenorhabditis elegans


Alignment Length:583 Identity:162/583 - (27%)
Similarity:257/583 - (44%) Gaps:106/583 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRK 68
            |.:|:.|....:..|..|:.:                |..:|:...:.:.:.....|..||:|..
 Worm    70 KSSDDTPKPIQISEDNMTTKK----------------FSQLGVCSWITQQLQTMQIKTATPVQAA 118

  Fly    69 TIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELG 133
            .||.||||.|::..|:||:|||..|.||:.:||. .:| .|..||||:||||||.|..:....||
 Worm   119 CIPKILEGSDILGCARTGTGKTLAFAIPILQKLS-VDP-YGIYALILTPTRELAFQIAEQFTALG 181

  Fly   134 RFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMD-----LKLNSIEYVVFDEAD 193
            :.:.||..:::||.|:..|...:...|.|:||||||...| :|.|     .....|::.|.||||
 Worm   182 KPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADL-IESDPDTIAKVFKKIQFFVLDEAD 245

  Fly   194 RLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPVLIR---LDVESKLPDALA 255
            |:.|..:.:||......:...|||::.|||:...:....|.....|....   .|.||.: |.|.
 Worm   246 RMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDKGKDDESTV-DRLE 309

  Fly   256 LKFLYC--RPDDRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPA 318
            .|::.|  ...|.|...||........:|..::||.|....:.::|:....|....|::|.:...
 Worm   310 QKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQK 374

  Fly   319 ARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYS 383
            .|....:.|.:|.:.|:|.||||:||:|||.:|.|||.:.|..||.::|||||.|||||.|:|.|
 Worm   375 QRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALS 439

  Fly   384 IVSTDDTAHLLDLHLFLNRPFNIHDSSALGTIPQDL---LEEEHLTVTDIKKSHHIAGVLRTSEN 445
            .|:.                   :|...|..:.|.:   |:|                 |:.|..
 Worm   440 FVTQ-------------------YDVELLQAVEQVIGKKLDE-----------------LKVSPK 468

  Fly   446 AYKKYLSSRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKVSAAERKL 510
            ...||::...||..:|..:::..||                       |:..|...:.......:
 Worm   469 HVTKYVTQVLVAKKEAELKLENQKF-----------------------GEKKEINRRKELLMSGM 510

  Fly   511 QEEKHD-ILVKMRSFRPGGTVFELNTTQKSTQFIVMKEKRMQHAEVINKFRQQRAEEDIDEEK 572
            .|::.| .|.:||:.|      ..|:.:|..:.....:||       ::|:::.|.:.:.:|:
 Worm   511 DEDEADRHLEEMRTRR------MTNSKRKLEKISGQLDKR-------DRFQKKLAAKKVKKEE 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 74/208 (36%)
SrmB 41..449 CDD:440279 135/420 (32%)
DBP10CT <679..721 CDD:462373
H20J04.4NP_001040789.1 SrmB 88..504 CDD:440279 144/494 (29%)
Blue background indicates that the domain is not in the aligned region.

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