DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32344 and ddx-27

DIOPT Version :9

Sequence 1:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_490891.2 Gene:ddx-27 / 171743 WormBaseID:WBGene00022148 Length:739 Species:Caenorhabditis elegans


Alignment Length:755 Identity:206/755 - (27%)
Similarity:320/755 - (42%) Gaps:178/755 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RKKQADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQ 66
            :.|::.|...|.|...|..:.|...::           .|:.|.|..:::|..:..||..|||||
 Worm   122 KSKKSQENEDFFSALIDGKSLDTSVNV-----------SFEQMNLSRQILKACSGAGYSDPTPIQ 175

  Fly    67 RKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGA---RALILSPTRELAVQTYKF 128
            :..||:.|.|:|:.|.|.||:||||.|::|:.|::..|  .|||   |.|:|.||||||:|.::.
 Worm   176 QACIPVALTGKDICACAATGTGKTAAFVLPILERMIYR--PKGASCTRVLVLVPTRELAIQVFQV 238

  Fly   129 IKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIEYVVFDEA 192
            .::|..|::|:..|..||..:.:|.:|:.:.|||:||||||.: ||.......|::||.:|.|||
 Worm   239 FRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVLVLDEA 303

  Fly   193 DRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALK 257
            ||:.|..|.:|:||.:.....:|||::||||:.:.:.|.|...|..||.|.::..:.....|..:
 Worm   304 DRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINENTDTALKLRQE 368

  Fly   258 FLYC---RPDDRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAA 319
            |:..   |..||...:..|:....  |:.|:||..|:...:.:..:|...||....:.|||....
 Worm   369 FIRIRAGRETDREAMVAALVTRTF--QTNTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQ 431

  Fly   320 RKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSI 384
            |..:.:||...::.||:.||:|:||:||..:..|:|::.|...|.::|||||.||||:.|.:.|:
 Worm   432 RIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISL 496

  Fly   385 VSTDDTAHLLDLHLFLNRPFNIHDSSALGTIPQDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKK 449
            |..|:...|.:          |.:|:|..|:.|.|:..|.:                   .||::
 Worm   497 VGEDERKLLKE----------IVNSNADRTLKQRLVAPEVV-------------------EAYRR 532

  Fly   450 YLS--SRPVASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAKV-----SAAE 507
            .:.  ...:...|...|.:|                  ..:.||||...|::..:|     :.||
 Worm   533 RIDELEETIQQIDEEDRAEK------------------ELRIAEASMAKTQNALEVGENGGAPAE 579

  Fly   508 RKLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVMKEKRMQHAEVINKFRQQRAEEDIDEE- 571
            |::...|...:.|.|.                     .:|||....:...|....:..|||..| 
 Worm   580 RRVWMMKESQIEKQRK---------------------REEKRQMKVDARKKAEAAKTPEDIQIEH 623

  Fly   572 ----------------KKTIEALNPSSGRMPTADEEAISSTFNKVVAPKRLQNMDALYKDKPKKK 620
                            .|.|.|:..|:|...               |.|..||          ||
 Worm   624 EAAFHVRAAKRARHSKNKRIRAVVESAGTKG---------------AGKAAQN----------KK 663

  Fly   621 KRKINSKDEDHYVPYQSADKHTEDGLAINNFERQAQNAEFSVSDRDLSQEVKHKPGLKK-----W 680
            |...|||.....:|            .:|...|..|.|:..           .|||.||     .
 Worm   664 KASSNSKTSLRDIP------------LVNAGSRGVQKAQKG-----------QKPGAKKGFTSAL 705

  Fly   681 DRIKKKMVSV-----QDPRANKIRTESGAWIPASFKTGRY 715
            ..:.||.|..     :|.:..|.|      :....||.:|
 Worm   706 ASVSKKSVKAARHGPEDSKFQKAR------VAHRMKTKKY 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32344NP_612028.4 DEADc 41..243 CDD:238167 86/205 (42%)
DEXDc 54..243 CDD:214692 82/192 (43%)
HELICc 263..384 CDD:238034 40/120 (33%)
DBP10CT 666..721 CDD:285373 14/60 (23%)
ddx-27NP_490891.2 SrmB 128..609 CDD:223587 166/563 (29%)
DEADc 150..354 CDD:238167 86/205 (42%)
Helicase_C 379..488 CDD:278689 37/110 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268859at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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