DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Claspin and Clspn

DIOPT Version :9

Sequence 1:NP_001286934.1 Gene:Claspin / 326205 FlyBaseID:FBgn0052251 Length:1465 Species:Drosophila melanogaster
Sequence 2:XP_006503185.1 Gene:Clspn / 269582 MGIID:2445153 Length:1328 Species:Mus musculus


Alignment Length:1436 Identity:331/1436 - (23%)
Similarity:573/1436 - (39%) Gaps:389/1436 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 DSLMDNEEDAGEDLKMYQE---DQEPQKQKTKKSAKKTNKDSKEESGEDQEHQEQKKPLKKIKLD 323
            ||.:|:.:.:.|.|:...|   |:|....|..|| :|..:||..|: ||::...:|....     
Mouse    25 DSPVDSGQGSFETLEPLSERDSDEEIFVSKKPKS-RKVLQDSDSEA-EDRDDAPEKPTYD----- 82

  Fly   324 NIDTKEDKEQIVKPKKMAKKNKQKVLSD-DES--EENQNEKVDQDHDLKKMS------------- 372
              |:.||.::.:...|...::..|.|:| |||  ||..:::..:..:...:.             
Mouse    83 --DSAEDTQENLHSGKSQSRSFPKALADSDESDMEETPSQESPETQEAPSLEPGHQTGHSVDFTT 145

  Fly   373 ----SENELEMGS----------DKEDQEMQEPPKKAKKNKQRMDSESEDEIPKTESEKITSSPK 423
                |:..|..|:          :||::.| |..::.||.:.|.: ||:.:.|..:|..:.....
Mouse   146 GRKLSKTLLREGAEGKAKSKRRLEKEERTM-EKIRRLKKKETRCE-ESDADRPLNDSGCLLEDSD 208

  Fly   424 NKLKGLV---DSESEPEETAEEV-SPVKNKLKGLVDSESEPELDNPEESAGEQEAPMESALSREK 484
            ....||.   ||..|.||:.|.: :.||||:|.  ..:.||.|:: |..:.|....:....:|::
Mouse   209 LFETGLEEENDSALEDEESLESIRAAVKNKVKN--RKKKEPTLES-EAFSLEDGNELSKGSARKE 270

  Fly   485 PKKAKVVRESAKKALEGMQAIQSEQQRLHREAHINVPYHQPKPRTLKEFLSRR------------ 537
            .|.|::.:|:.||       :.||.|||.||:.:|:|||.|:.:|:.:|..|:            
Mouse   271 RKAARLSKEALKK-------LHSETQRLVRESALNLPYHMPESKTIHDFFKRKPRPTCQGSAMAL 328

  Fly   538 -------------TINAPLATALAGGSPMPSRQPRKSVGLRMTREELEAYAKLMEDRAKEATEFF 589
                         |:|.  |.|...|:...||...:..|..:..|     ..::.:.::||    
Mouse   329 LKSCKYQSGHYKETVNP--ADAAGMGAEDSSRGSEQRTGAGIAAE-----TNVLSEVSEEA---- 382

  Fly   590 KSESESDEE--DDSENEEPMELKDNPGVMDEMLDNPKTPEQPKNDTEDMTSQAVIEVPVLGEDKT 652
            ...:.|||.  .|......:|:::.....|   |.|.:|      .:...||....:|.: ||..
Mouse   383 GITAGSDEACGKDPVRRGELEIEETEKHSD---DRPYSP------GDRSMSQQESSIPRI-EDNE 437

  Fly   653 DDTVGDEAMVADSITEEEPIASTSTAAALKLADNFEI-----QQETNAKSPSKVCLVTEVVELP- 711
            ....||       :||.:|.|  .....||..:..:.     :|:|.:.:.:.|.:||.....| 
Mouse   438 GHQAGD-------LTESDPPA--LEGEELKTVEKTDAKEGMPEQKTQSAAAAAVAVVTAAAAPPE 493

  Fly   712 KLDLSTINITPSSKPATPKISEVIRQLKIEKSLDESPSLKGDPNMVIDLETGDMFAKKPTGVDDL 776
            |:...|:              :.:|||.::.|  ..|.|..|.:..:.|:.    .|....::.|
Mouse   494 KVRRFTV--------------DRLRQLGVDVS--SQPRLGADEDSFVILDE----PKTNRELEAL 538

  Fly   777 LNRLMK-TREAKKHKTTETVNI------LTT---EHGKLEMSKVSIHLHEEEIAKEPKPGAGYMK 831
            ..|..: ...|...:..:|||:      |.|   |..|.|:..|::...:.|.|...|||.....
Mouse   539 KQRFWRHANPAASPRACQTVNVNIIVKDLGTNGKEELKAEVVPVTLAAEKLEGASHAKPGEKLQM 603

  Fly   832 MQEHLKTLITKKRMEDLRKKQA-------------EEQEKMAEDEEE------GMDVDEEYEPED 877
            ::..|:..:..:|:|:.:|:||             ||:|:|.::.||      |.:.:|:.:.::
Mouse   604 LKAKLQEAMKLRRLEERQKRQALFKLDNEDGFEEEEEEEEMTDESEEDGEEEVGEEEEEDQDIQE 668

  Fly   878 KPGY---AEVTINEDEEIIDKVDS-TAEDDGDA-----------------------------EEN 909
            ...|   :|.|..:||:..||.:: |:.|.|.:                             .|.
Mouse   669 TTEYLLGSEDTETKDEKETDKENTDTSSDIGKSVALCVPKPLSSDSTLLLFKDSSSKMGYFPTEE 733

  Fly   910 KNDADE---------DPEDNPVEDSEDEKNDSESE---------QECE---------------AN 941
            |::.||         |.:|:....:::..::|..|         |.|.               .:
Mouse   734 KSETDEYLAKQSDKLDEDDSSSLLTKESSHNSSFELIGSTIPSYQPCNRQIGRGASFLPTAGFRS 798

  Fly   942 PEPE-------TQTRKKNRIIKAFEDDNSDEDDLDL-LQTPKPSN-----------VAPITATQL 987
            |.|.       :...|.:.  |..|.....||..|| ..:|:|..           :...|.:||
Mouse   799 PSPGLFRGSLISSASKSSG--KLSEPSLPVEDSQDLYTASPEPKTLFLGAGDFQFCLEDDTQSQL 861

  Fly   988 QLSAHKLFDVETRR-----------TASDEEN-------ELLDLCSGQFPQTQMLSSDAPSVDTA 1034
             |.|....::...|           .||.:||       ||||||:|||              |:
Mouse   862 -LDADGFLNIRNHRHRYQAVKPQLPLASMDENAMDANMDELLDLCTGQF--------------TS 911

  Fly  1035 VISQIPMTQFGGSSQAADELEGLCSGTFATQLPSQ-APTQQPEQQEESEVPAAVANRIVSSDEEA 1098
            ...:....:.....:..:||..||||.|.||..|. ||.....|::|            ||.|:.
Mouse   912 QPEEKCQPRKNDKKENMEELLNLCSGKFPTQDASPVAPLGLRSQEKE------------SSTEDP 964

  Fly  1099 QEDALEVDKPRNKKLTKKRPKKKAKLGFSDDEDSDDEVEEF----------------DEESDAEP 1147
            .|:||.:                ....|..|.:.:.|.|||                ||.||:..
Mouse   965 MEEALAL----------------CSGSFPTDREEEGEEEEFGDFQLVSKENGFASDEDEHSDSND 1013

  Fly  1148 VEEIPETFVDYDSEENEIVVEMTKKDRKIRAANFVDKEAELSESEWGSADE-DEKNMDEYDIELG 1211
             ||:.   :|.:.:|.|::.:..|..|::|...:::.|||:|.|:.||.|| |.:.:|||:.::.
Mouse  1014 -EELA---LDLEDDEEELLKQSEKMKRQMRLKKYLEDEAEVSGSDVGSEDEYDGEEIDEYEEDVI 1074

  Fly  1212 DEDQFDRDKLRHELGQIHARKMMDQDIREVRKIKELLFEE---EEEGANRQRQFRWKNVEAGFSL 1273
            ||.....::|..::.:||.:.|:|.|.|.:|..:|....:   ..:|..|.|:||||:::....:
Mouse  1075 DEVLPSDEELESQIKKIHMKTMLDDDKRRLRLYQERYLADGDLHSDGPGRTRKFRWKHIDDTSQM 1139

  Fly  1274 DDNRTDNGEGNDGSGDEENEHLWRKIRYEREQLLLEKGLKPEVASPLSTSVINTSNNGNSPAIRR 1338
            |....|:.:.......:|.|..|||.|.||||.|.|:..:.::|:       :..:.|:.   .:
Mouse  1140 DLFHRDSDDDQVEEQLDETEAKWRKERIEREQWLREQAQQGKIAA-------DEEDIGDD---SQ 1194

  Fly  1339 LNIISSKKTTVEVKKNSPFLISKTIAGKQQKSAVR----------------GSFLIRDQQTLSKL 1387
            ..:::.|.|...::||:    |.|:..::.||.:|                ||.|.:.:..|.||
Mouse  1195 FMMLAKKVTAKALQKNA----SHTVVVQESKSVLRNPFETIRPGGAHQLKTGSLLNQPKAVLQKL 1255

  Fly  1388 AGLTKGTSGDVDAAEGTISVKSAKAKNFVFATLTEEEHENRKRKAADILNSSTETGVNFIKKPKL 1452
            |.|:     |::.:      ....::||||.||:..:.|..|..:...:.   ..|::.:..|  
Mouse  1256 AALS-----DLNPS------APRNSRNFVFHTLSPTKAEAAKDSSKPQVR---RRGLSSMMSP-- 1304

  Fly  1453 EPRRDK 1458
            .|:|.|
Mouse  1305 SPKRLK 1310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClaspinNP_001286934.1 infB 58..>180 CDD:177089
2A1904 <96..411 CDD:273344 42/181 (23%)
MDN1 <861..947 CDD:227596 26/164 (16%)
ClspnXP_006503185.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842655
Domainoid 1 1.000 179 1.000 Domainoid score I3512
eggNOG 1 0.900 - - E1_KOG4156
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I3987
Isobase 1 0.950 - 0 Normalized mean entropy S8226
OMA 1 1.010 - - QHG47598
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007571
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14396
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7601
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.900

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