DRSC/TRiP Functional Genomics Resources

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Protein Alignment Claspin and mrc1

DIOPT Version :9

Sequence 1:NP_001286934.1 Gene:Claspin / 326205 FlyBaseID:FBgn0052251 Length:1465 Species:Drosophila melanogaster
Sequence 2:NP_594486.1 Gene:mrc1 / 2543240 PomBaseID:SPAC694.06c Length:1019 Species:Schizosaccharomyces pombe


Alignment Length:1143 Identity:243/1143 - (21%)
Similarity:426/1143 - (37%) Gaps:271/1143 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 EETAEEVSPVKNKLKGLVDSESEPELDNPEESAGEQEAPMESALSREKPKKAKVVRESAKKALEG 501
            :|.|:|:..:.:..:..::.:.|..||.|.....:..|.::..||.....:|.:.:||....||.
pombe     5 DENADELHRMDSSDEASINDDQEDILDTPRTRVRKMLASVDMQLSSNAVSEASLDKESTVGNLEN 69

  Fly   502 MQ-AIQSEQQRLHREAHINVPYHQPKPRTLKEFLSRRTINAPLATALAGGSPMPSRQPRKSVGLR 565
            .: ...|.:..||.:.:....:.....|.      ||.:|.      .||.   |...:|.|   
pombe    70 QKNRSYSSEIYLHSDTNFLSNFDSAYERV------RRLLNQ------QGGK---SSLQKKEV--- 116

  Fly   566 MTREELEAYAKLMEDRAKEATEFFKSESESDEEDDSEN---EEPMELKDN--PGVMDEMLDNPKT 625
               |::|         .:|..:..|....|:.:|...|   ::.:|.|.|  ....::::.|..|
pombe   117 ---EQIE---------TQEGGDNAKGSPSSENKDSDRNSRLQQLIEKKRNALKKEQEDLIQNSAT 169

  Fly   626 PEQPKNDTEDMTSQAVIEVPVLGEDKTDDTVGDEAMVADSITEEEPIASTSTAAALKLADNFEIQ 690
             ...|:|..|            .|...|..:.||:.::...|.:..|.:.|..|.|:|..|    
pombe   170 -SHSKSDNLD------------SESADDSDLADESELSKKYTSDRKIRNASKKALLELHRN---- 217

  Fly   691 QETNAKSPSKVCLVTEVVELPKLDL----------------------STINIT--PSSKPATPK- 730
               .|:...:..|..|||...|:.|                      ...|.|  |:.:...|| 
pombe   218 ---TARLTRETALKPEVVVKKKVTLREFFQKIGFKNDNQLENKAISEEEANSTEPPNVEKEEPKP 279

  Fly   731 ---------ISEVIRQLKIEKSLDESPSLKGDPNMVIDLETGDMF-------AKKPTGVDDLLNR 779
                     .||.|::|.:|   |:|..||......:|:....:|       .||    :|....
pombe   280 SVDRSTGIVNSEDIKELSVE---DDSLELKEITPEALDIGQTSLFTTLNQTQVKK----EDNKKF 337

  Fly   780 LMKTREAK--------------KHKTTETVNILTT------EH---GKLEMSKVSIHLHEEEIAK 821
            |:|...||              |.|||...||..:      ||   |||:      .|.|.:::|
pombe   338 LLKEINAKLNEDDIDSELEIEVKPKTTALDNIEKSKLSEENEHGIKGKLK------QLAEIKLSK 396

  Fly   822 EPKPGAGYMKMQEHLKTLITKKR-MEDLRKKQAEEQEKMAEDEEEGM---DVDEEYEPEDKPGYA 882
            :.||......::...:.|:.:.. |..|::.|.||:.|     .:|:   .:..|.|.|:.|  .
pombe   397 DGKPFENEFNIKSFNRNLVKRAAVMAKLQRNQLEEELK-----AKGIYKPTIQGEKEEEEDP--L 454

  Fly   883 EVTINEDEEI--IDKVDSTAEDDGDAEENKNDADE--DPEDNPVEDSEDEKNDSESEQECEANPE 943
            |...|:.|:|  ::|....|.|:|:.    ||.:|  ...:.|...::.......|:...||...
pombe   455 ERARNDAEKIRQLEKASGNASDEGEL----NDEEEVISSSNTPSTKAKTTNKVIISDVIIEATQA 515

  Fly   944 PETQTRKKNRIIKAFED---DNSDEDDLDLLQTPKPSNVAPITATQLQLSAHKLFDVETRRTASD 1005
            ...:.:|.:|::...||   |:....::.:.::...||...|..:..:||:..:.|.:......|
pombe   516 EPKRRQKNSRVVFDEEDLTGDSHGSSNMKISESDDESNGDMIRDSFDRLSSESIKDSQKTEELHD 580

  Fly  1006 E--ENELLDLCSGQFPQTQMLSSDAPSVDTAVISQIPMTQFGGSSQAADELEGLCSGTFATQLPS 1068
            .  .|:.:|..:..:.|....|:...::..|..|| |..::..||:  |:.    :.|.:|| ||
pombe   581 SFGINDEVDQSTSLYVQNSQPSASQLTIVDATYSQ-PPPRWESSSR--DDK----TNTSSTQ-PS 637

  Fly  1069 QAPTQQPEQQEESEVPA---AVANRIVSSDEEAQEDALEVDKPRNKKLTKKRPKKKAKLGFSDDE 1130
            |..:..|.|. :|.:|.   :|.......|||..|:..|..:.....|::.....| ..|.:|..
pombe   638 QVDSLVPTQL-DSTIPTQIDSVQRNKDQDDEEILEERRESRRDSKTFLSRTMLYNK-DTGKADSA 700

  Fly  1131 DSDDEVEEFDEESDAEPVEEIPETFVDYD-----SEENEIVVEMTKKDRKIRAANFVDKEAELSE 1190
            .:.|.:||...|||.|           |.     |::.     ::..|.::...|.:|.|..:.:
pombe   701 WASDLIEEQAIESDDE-----------YAGIGGLSDDG-----LSDSDAELEVQNMIDDETTIQK 749

  Fly  1191 SEWGS---------ADEDEKNMDEY--DIELG--------------DEDQFDRDKLRHE-LGQIH 1229
            .|..|         .|.|||.:.:.  |:..|              |.|..|...||.| |.::.
pombe   750 GEVASMAQFAKDQEMDRDEKLVKQLMKDVTTGALRKRNRNGFAALDDSDDEDYSNLRREKLKELR 814

  Fly  1230 ARKMMDQ---DIREVRKIKELLFEEEEEGANRQRQFRWKNVEAGFSLDDNRTDNGEGNDGSGDEE 1291
            .:|:::.   ::.|..|.|..|...|:...:.:....|        ||....|:|.|:...||  
pombe   815 RQKLLEDGNLNVLEGDKRKAFLATVEDSLVSSKDNLTW--------LDATVEDSGVGSSDLGD-- 869

  Fly  1292 NEHLW--RKIRYEREQLLLEKGLK------PEVASPL---STSVINTSNNGNS--------PAIR 1337
             |:|:  :.:.:|.|:.:.|:..:      |.|...:   .:|..:||:| ||        |.:|
pombe   870 -EYLYSEQSLNHEEEEQMEEELSEIFSSGGPNVVDRVYLKKSSTRHTSDN-NSLEEVLPIFPGVR 932

  Fly  1338 RLNIISSKKTTVEVKKNSPFLISKTIAGKQQKSAVRGSFLIRDQQTLSKLAGL-TKGTSGDVDAA 1401
            :|  :|:.::    :|........::..|..|:.:..|   ..:....|..|| .:.:..|:...
pombe   933 KL--VSNSQS----EKIGDLSNDNSMGAKSYKTPIISS---TQRPQGRKFRGLMNQSSKADISRT 988

  Fly  1402 EGTISVKSAKAKNFVFATLTEEEHENRKRKAADILNSS 1439
            ....|:|          .:...:..|..|..|.:.|.|
pombe   989 VDAGSIK----------VVPNSQSANPPRLLASLNNYS 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClaspinNP_001286934.1 infB 58..>180 CDD:177089
2A1904 <96..411 CDD:273344
MDN1 <861..947 CDD:227596 20/92 (22%)
mrc1NP_594486.1 MRC1 701..837 CDD:286523 32/151 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14396
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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