DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cnx14D and clgn

DIOPT Version :9

Sequence 1:NP_573131.1 Gene:Cnx14D / 32620 FlyBaseID:FBgn0264077 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001071009.1 Gene:clgn / 556495 ZFINID:ZDB-GENE-060929-708 Length:630 Species:Danio rerio


Alignment Length:666 Identity:306/666 - (45%)
Similarity:407/666 - (61%) Gaps:65/666 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPG----------AIYGDE----KFAYKSPV 51
            :.|.  :...||||.:.......|.....|:.|:|.|          ::..|.    :..||:||
Zfish     3 LRWS--WTCFLLLSISMVTLAQDEDLEDEEEAQVEDGDLDMEADSSESVEADANVSFQVTYKTPV 65

  Fly    52 IDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKA 116
            ...:.| |.:.|||  .|...|.:|:..|.|..::||||||.|..|..:......||||||||:|
Zfish    66 PTGDVF-FTETFDD--GSLGSWQVSKTMKEDADEDIAKYDGKWEVEPLKENTVPGDLGLVLKSRA 127

  Fly   117 KHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMF 181
            ||.||:|...:||.|| :|||:||||:..|:|.||||:|:||||..|..| |.:|:|:|||:|||
Zfish   128 KHHAISALLNKPFVFK-DKPLIVQYEVNFQDGIDCGGAYIKLLSDSKDLE-LEQFHDRTPYSIMF 190

  Fly   182 GPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDH 246
            ||||||.:.|:||||||.|||||::.|||.|:|:..|...:|||..||:.||:.||||:|..:|.
Zfish   191 GPDKCGEDYKLHFIFRHKNPLNGDVEEKHAKRPDVDLKKIYTDKKTHLFTLVLNPDNSYETFIDQ 255

  Fly   247 KIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVM 311
            ..:..||||||.|||||||.|||||.|.|||.||||.|||||.|.|||:|||:|...:||.|||.
Zfish   256 SSVSRGSLLTDVVPPVNPPKEIDDPKDSKPEDWDERAKIPDPEAVKPEEWDEEALAKVPDPDAVK 320

  Fly   312 PNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWS 376
            |:|||:|||:.:.||||.:|:||:.|:|||||||.|.||.|..|||||:||.|::.||.|||||.
Zfish   321 PDGWLDDEPEFVSDPTAEKPDDWDEEMDGEWEAPQVPNPACTSAPGCGEWKPPMVNNPKYKGKWK 385

  Fly   377 APMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARD 441
            ||:|:|||.||.|:||||.|||.||||.||:|.|..|||||||||:|||.|||.|||.:.|:|..
Zfish   386 APLIDNPNYQGVWSPRKIPNPDHFEDLHPFRMEPFRAVGLELWSMTSDIYFDNFIITTEKEVADR 450

  Fly   442 FAANSFDIKRLYIDRESFG--NKVVELARANRAIWGIVIVAIAVPVA-ITIFCKFGLGPSRVAAA 503
            :||:|:.:|:|.......|  :::...|.....:|.|.|:.|.:|:. :.:||    .|.     
Zfish   451 WAADSWGLKKLVASANEPGVLSQLALAAEERPWLWVIYILTIGLPIGLVVLFC----WPK----- 506

  Fly   504 KKAAAAAAKKTDDPQPDDDLGAEEEEKLE-------KGKKEEEKKEEEEEEEK--EENKEEKKEE 559
            |.......||.|.|:.:.:..|||||:.|       |||.::|.|.||..|..  :||.:...:|
Zfish   507 KSDDDYVYKKIDQPKTESEEVAEEEEEEEDEEEGDGKGKDDDEAKAEEATEATAGDENGDMMGQE 571

  Fly   560 EKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKN 624
            ..:|..|.:: ||||:|||:::..|.:|.|:.|..|                     |.::.|::
Zfish   572 NGEDGGETEE-EEEEEDEEEEEAIKPNETASEDEMK---------------------DADEGLES 614

  Fly   625 KEPTPKK-RKRKALKE 639
            :|..||. |||:..|:
Zfish   615 REEEPKAVRKRRVRKD 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnx14DNP_573131.1 Calreticulin 59..432 CDD:278680 225/372 (60%)
clgnNP_001071009.1 Calreticulin 72..441 CDD:278680 225/372 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 518 1.000 Domainoid score I295
eggNOG 1 0.900 - - E1_KOG0675
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 586 1.000 Inparanoid score I960
OMA 1 1.010 - - QHG48587
OrthoDB 1 1.010 - - D230478at33208
OrthoFinder 1 1.000 - - FOG0001260
OrthoInspector 1 1.000 - - mtm6387
orthoMCL 1 0.900 - - OOG6_102144
Panther 1 1.100 - - O PTHR11073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X875
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

Return to query results.
Submit another query.